Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01502 ATGTGTAGCTCTAAGGCCAAAGTGAGTGTGGGCATAGAATccaccaccacaaccacaaccacaaccacaccctcaGTGGCTAGAATCAATGGCAGGCCAGTCCTTCAACCAACTTGCAACCGTGTTCCAAGCCTTGAGAGGAGGAATTCAATCAAGAAAGTGGCACCACCAAAGTCACTTTCTCCACCTTCACCACCACTTCCAAGCAAGGCTTCATTGACACCCCCAGTTTCTCCAAAGTCAAAGTCCCCTAGGCTTCCTGCAACAAAGAGAGGCAATGACAACAATGGACTTAACTTGAGTTCTGAAAAGATTGTGATCCCAAGAAGCTCCACAAAGGCTCCAACTTTGGAGAGAAAGAAGTCCAAGAGCTTCAAGGAAGGGTCATGTGCTTCTATTGAGGCCTCATTGAGTTACTCCTCCTCTTTGATCACTGACTCCCCAGGGAGCATTGCTGCTGTGAGGAGGGAACAGATGGCACTGCAGCAGGCACAAAGGAAAATGAAGATTGCTCATTATGGAAGATCAAAGTCTGCCAAGTTTGAAAGAGTTGTTCCTCTTGATCCTTCAACCACTACTCTTACATCCAAGCCAACTGAGGAGGAGAAGAGATGCAGCTTTATCACAGCCAATTCAGATCCCATCTATATTGCTTACCATGATGAGGAATGGGGAGTTCCAGTTCATGATGACAAGATGTTGTTTGAACTTTTAGTTTTAAGCGGTGCTCAAGTTGGATCTGATTGGACCTCAACCTTGAAGAAACGCCTAGATTTCAGGGCTGCATTCTCAGAATTTGATGCAGAAACCGTGGCCAACTTGACTGATAAGCAAATGATGTGTATTAGTTCTGAATATGGCATCGACATGAGCAAAGTCCGAGGAGTTGTTGATAATGCAAACCAAATTTTAGAGATTAAGAAGGACTTTGGTTCATTTGACAAGTACATTTGGGGGTTTGTGAATCATAAACCAATCTCCACTCAATACAAGTTTGGCCACAAGATTCCAGTGAAGACATCAAAATCAGAGAGCATAAGCAAAGACATGGTGAGGAGGGGCTTTAGGTTTGTTGGTCCAACAGTGGTTCATTCATTCATGCAGGCATCTGGCCTCACCAATGACCACTTAATCACTTGCCACAGGCACTTGCAGTGCACCCTATTGGCAGCAAAACCTCATTCTACTACCATAGAGCCCTCTCAATAG 1209 0.4334 MCSSKAKVSVGIESTTTTTTTTTPSVARINGRPVLQPTCNRVPSLERRNSIKKVAPPKSLSPPSPPLPSKASLTPPVSPKSKSPRLPATKRGNDNNGLNLSSEKIVIPRSSTKAPTLERKKSKSFKEGSCASIEASLSYSSSLITDSPGSIAAVRREQMALQQAQRKMKIAHYGRSKSAKFERVVPLDPSTTTLTSKPTEEEKRCSFITANSDPIYIAYHDEEWGVPVHDDKMLFELLVLSGAQVGSDWTSTLKKRLDFRAAFSEFDAETVANLTDKQMMCISSEYGIDMSKVRGVVDNANQILEIKKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQASGLTNDHLITCHRHLQCTLLAAKPHSTTIEPSQ 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01502 402 PANTHER OS04G0501200 PROTEIN 1 397 - -
Cca10g01502 402 MobiDBLite consensus disorder prediction 88 109 - -
Cca10g01502 402 MobiDBLite consensus disorder prediction 58 73 - -
Cca10g01502 402 SUPERFAMILY DNA-glycosylase 203 386 IPR011257 GO:0003824|GO:0006281
Cca10g01502 402 MobiDBLite consensus disorder prediction 1 121 - -
Cca10g01502 402 Gene3D Hypothetical protein; domain 2 202 386 - -
Cca10g01502 402 MobiDBLite consensus disorder prediction 1 29 - -
Cca10g01502 402 Pfam Methyladenine glycosylase 210 383 IPR005019 GO:0006284|GO:0008725
Cca10g01502 402 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01502 Cca-Chr10 24107473 24110544 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01502 10 24107473 24110544 Cca04g01651 04 26074956 26077984 PCT