Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01501 ATGAGGCTCCACTACCCATACCTTACCCTTTTCATGCTTTTGGACATGAGCACCATAACCATTTATGGTCTTGCTACACAAGGAACCATACCCTCTGAGGCCTTGCTGTCCATTGGTCACTATCAAAGAACATGCCCAGATGCTGAAGGCATCATCTCACAAAAGGTTGCTGCTTGGGTTAAGAAGGACCCCTCATTGGCCCCTGCCATCATTCGCCTTCACTTCCATGACTGTGCTGTTAGAGGATGTGATGGATCAATTCTGCTTGACCATCCAGGGAGTGAGAGGAGAGCCTTAGAGAGCAGAACTCTGAGGGGGTTCCAATTGATTGATGAAATCAAGGTTGAGTTAGAAAGGAGGTGTCCAAGAACAGTCTCTTGTGCTGACATTCTCACTGCTGCTGCAAGAGATGCCACTCTTTTGGCTGGAGGACCATTCTGGGAAGTCCCATTTGGTAGAAAAGATGGCAAAATTTCCTTAGCCAGTGAGGCCAATTTGGTCCCCCAGGGCCATGAAAACATCACAGCCCTTATTGCATTCTTTCAAGAAAGAGGGTTGGACATGCTTGATTTGGTCACTCTCTCAGGTTCACACACAATTGGGAGGAGCACTTGCTCCTCTTTTGTGGACAGGATTCACAACTTCAATGGGACTGGAAAGCCTGACCCCTCACTCAATGTCTATTTCTTGAAGCTGTTGAGGAAGAGGTGCCAAAGGGTATTGGATTTGGTGCACCTTGATGTTATAACCCCAAGGACTTTTGACACAACCTATTACACTAACCTTATGAGGAAGGTGGGGTTGTTGTCAACAGATCAGTTACTTTTTTCAGATGCAAGGACTGCTCCTTTTGTTGAAGCATTTGCAACACAGCCTTTCCTTTTCACTAGCCAGTTTTCAGTGTCAATGGTCAAGCTTGGGAATGTTCAAGTTCTGACTAGGCCTAATGAAGGTGAAATCAGAGTTGATTGCAATTATGTCAATAGAATCTAA 993 0.4552 MRLHYPYLTLFMLLDMSTITIYGLATQGTIPSEALLSIGHYQRTCPDAEGIISQKVAAWVKKDPSLAPAIIRLHFHDCAVRGCDGSILLDHPGSERRALESRTLRGFQLIDEIKVELERRCPRTVSCADILTAAARDATLLAGGPFWEVPFGRKDGKISLASEANLVPQGHENITALIAFFQERGLDMLDLVTLSGSHTIGRSTCSSFVDRIHNFNGTGKPDPSLNVYFLKLLRKRCQRVLDLVHLDVITPRTFDTTYYTNLMRKVGLLSTDQLLFSDARTAPFVEAFATQPFLFTSQFSVSMVKLGNVQVLTRPNEGEIRVDCNYVNRI 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01501 330 Pfam Peroxidase 53 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 ProSiteProfiles Plant heme peroxidase family profile. 35 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PANTHER PEROXIDASE 20 327 - -
Cca10g01501 330 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Cca10g01501 330 PANTHER PEROXIDASE 25-RELATED 20 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 Gene3D Peroxidase, domain 2 168 306 - -
Cca10g01501 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Cca10g01501 330 CDD secretory_peroxidase 36 327 IPR033905 GO:0004601|GO:0042744
Cca10g01501 330 Gene3D - 39 328 - -
Cca10g01501 330 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca10g01501 330 SUPERFAMILY Heme-dependent peroxidases 36 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01501 Cca-Chr10 24080248 24082646 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01501 10 24080248 24082646 Cca10g01501 10 24080248 24082646 ECH