Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01457 ATGGCGTCTTCCAGCGCAGCCGGTGCTGGATCCACCGATCCCACAGCTGCCAGGAGAAACAACACCAAGCGACCTAAGTATTCGAAGTTTACCCAGCAAGAACTTCCAGCGTGTAAGCCAATTCTCACGCCACGAGCGGTTATTTCGGCATTCTTGCTTGTCAGTGTTGTATTTGTTCCTATTGGAGTTGCTGCACTGATTGCTTCAAGGAAGGTTGTTGAAATTGTTTATAGGTATGAATCAAAATGCATACCACCCAACGTTACTGACAAGGTGGCATACATTCAGAGTTCTGCAGATAAAACATGCAAATTTTCACTACATGTGGAAAAGCACATGAAGTCACCTATTTATGTCTACTATCAGCTTGACAACTTCTACCAGAATCATCGCCGATATGTTAAAAGTCGAAGTGATGAGCAATTGAGGGATCCTGGTGAAGAGGACTCAACAAGTGCTTGTAAGCCTGAAGATACAGCCAATGGAAAGGCAATTGTACCATGTGGTCTTATAGCTTGGAGTTTATTCAATGACACGTACAGCTTCTCTCGTGACAACCATAATTTGACGGTGAACAAGAAGGGCATCTCCTGGAAAAGTGATAGAGAGCACAAATTTGGGAAAAATGTTTTCCCTAAAAACTTCCAGAACAGTTCTATTAAAGGTGGTGCAAGTCTCAATGAATCCATACCATTGAGTGAACAGGAGGATCTTATTGTCTGGATGCGAACTGCTGCTTTGCCTACTTTTAGGAAGTTATATGGAAAGATCGAGGTGGATCTGAATGAAGGTGATAGCATAAATGTAACACTGCAGAATAAATATAACACATACAGCTTTAATGGCAGGAAAAAGCTTGTACTGTCAACTACTAGCTGGCTTGGTGGGAAGAATGACTTCCTTGGCATTGCATATCTCACTGTAGGAGGATTGTGCTTCTTTTTGGCTTTGGCTTTTACCATTGTATATTTTGTCAAGCCAAGGCAACTTGGAGACCCCACATATTTATCATGGAACAGGAATCCAGGAGGGCACTGA 1038 0.4249 MASSSAAGAGSTDPTAARRNNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSVVFVPIGVAALIASRKVVEIVYRYESKCIPPNVTDKVAYIQSSADKTCKFSLHVEKHMKSPIYVYYQLDNFYQNHRRYVKSRSDEQLRDPGEEDSTSACKPEDTANGKAIVPCGLIAWSLFNDTYSFSRDNHNLTVNKKGISWKSDREHKFGKNVFPKNFQNSSIKGGASLNESIPLSEQEDLIVWMRTAALPTFRKLYGKIEVDLNEGDSINVTLQNKYNTYSFNGRKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPTYLSWNRNPGGH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01457 345 PANTHER CELL CYCLE CONTROL PROTEIN 50 2 344 IPR005045 GO:0016020
Cca10g01457 345 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 66 329 IPR005045 GO:0016020
Cca10g01457 345 PANTHER ALA-INTERACTING SUBUNIT 3 2 344 - -
Cca10g01457 345 PIRSF Lem3/Cdc50 1 341 IPR005045 GO:0016020
Cca10g01457 345 MobiDBLite consensus disorder prediction 137 154 - -
Cca10g01457 345 MobiDBLite consensus disorder prediction 137 158 - -
Cca10g01457 345 MobiDBLite consensus disorder prediction 1 18 - -
Cca10g01457 345 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01457 Cca-Chr10 22356828 22364187 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01457 10 22356828 22364187 Cca10g01457 10 22356828 22364187 ECH
Cca10g01457 10 22356828 22364187 Cca04g01677 04 27308629 27314138 PCT