Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01447 ATGGCTTTTCTTCTACCAAATCTCCAACCTTCTCTCTTGGCCCAATCCAAATCCAAAGACAAACCCCTTCACCAAACTCTCTCACCATCAAAACCCACTTCTCACTTTCCCTTATCTTCCACCACATGCTCCTCTTTACCTCTCCAAACAACTTCAATTGCACAGGTTAACACACCACAGGATAATAAGCAGCAACACCAGCCAAAGGATGAATTCTACCTCAACCTTGGCCTTGCTGTCAGGACCATCCGTGAGGACCTTCCTTTGATCTTCATCAAAGACCTCAATTATGAAATTTATAGGGATGACATAACATTCATGGACCCCTTGAACACATTTACTGGGATTGAGAAGTACAAATTGATCTTCTGGGCATTGAGGTTTCATGGCAAAATCCTGTTTCGGGAGATTGCACTTGATGTGTATAGGGTGTGGCAGCCTTCAGAGAATGTGATATTGGTTAGGTGGAACCTCAAGGGTGTGCCAAGGGTTCCTTGGGAGACCAAAGGAGAGTTTCAGGGCACTTCAAGGTACAAATTGGACAGAAATGGCAAAATTTATGAACACAAAGTTGATAACTTGGCATTTAATTTCCCACAGAATATTAAACCAGTTTCAGTTTTGGATTTGGTTACTGCATGCCCTGCAAGTCCAAATCCTACCTTTTTGTGGAGTCCTGTTGATGCCTACTCTTCTTCATGGTTAGCCTTTTACAAAGCAGTTAAGGACACATTGGATCAAGAGGGGAGTTTGCTACCTCAAGATGGTCTTGCTACATGTTCATAG 786 0.4288 MAFLLPNLQPSLLAQSKSKDKPLHQTLSPSKPTSHFPLSSTTCSSLPLQTTSIAQVNTPQDNKQQHQPKDEFYLNLGLAVRTIREDLPLIFIKDLNYEIYRDDITFMDPLNTFTGIEKYKLIFWALRFHGKILFREIALDVYRVWQPSENVILVRWNLKGVPRVPWETKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQNIKPVSVLDLVTACPASPNPTFLWSPVDAYSSSWLAFYKAVKDTLDQEGSLLPQDGLATCS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01447 261 MobiDBLite consensus disorder prediction 16 42 - -
Cca10g01447 261 PANTHER RIKEN CDNA 2310061I04 GENE 1 261 IPR018790 -
Cca10g01447 261 PANTHER OSJNBA0070C17.17-LIKE PROTEIN 1 261 - -
Cca10g01447 261 Pfam Uncharacterized conserved protein (DUF2358) 79 189 IPR018790 -
Cca10g01447 261 SUPERFAMILY NTF2-like 95 190 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01447 Cca-Chr10 22116690 22118704 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01447 10 22116690 22118704 Cca10g01447 10 22116690 22118704 ECH
Cca10g01447 10 22116690 22118704 Cca04g01681 04 27471250 27473458 PCT