Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01364 ATGACATCAAGTTTCAACACTTCAAATTCCTTATATGACTTTATTGTCAGAGATGGCAATGGCGTGAAAGGGTTGGTAGACTCAGGTGTATTAGATGTTCCAGAGAGGTACATACAACCCCCAGAGGAAAGAATCAAGAAGGAAGATTCAAGGATATGTGATGCTCCACCCATTGACTTGTCAAAGCTGAATGGAGCTGAGCATGAGAAAGTGGTGGATGAGATTGTTAGAGCAGCTGAGACTCTTGGCTTCTTTCAGGTGGTGAATCATGGTGTTCCTTTGGAGTTGTTGGAATCACTCAAAGATGCTGCACACACATTCTTCAACTTGCCACCAGAGAAGAAAGTTGTTTACTGCACTGGGGTGAGTCCAAGCCCTAAGGTAAAATATGGGACTAGCTTTGTGCCAGAGAAAGAGAAGGCCTTGGAATGGAAAGACTATATCAGTATGGTATATAACAGTGATAAAGAAGCTATTCAATATTGGCCTAATCAGTGCAAGGAATTTGCACTTGAGTATTTGAAGTTGTCATCTAAGATGGTTAGAGACATTGTGGAAATCTTGATAGGTAAGCTTGGAGTTGTAATAGAAGATTCAAAAGTTGAGAGCCTTCTTGGTATGAAGATGGTAAACATGAACTACTACCCAGCATGTCCAAATCCAGAGCTCACAGTGGGTGTAGGGCGTCACTCTGACATGGGAGCTATCACAGTGCTACTCCAAGATGGCATTGGAGGCTTGTATGTCAAAGTGGAAGAAGAAAATGATGCTGGAAAAGGAGAGTGGTTGGAAATTCCACCAATCCCGGGAGCTCTTGTCATCAATATTGGTGATACTTTACAGATACTGAGCAATGGGAAGTTCAAGAGTGCTGAACATCGAGTGAGGGCAACTAGCACCCAATCTAGGGTATCAGTTCCGGTGTTTACTGCGCCAATAGCTACAGAGAGGATAGGTCCACTGCCAGAAGTGGTGAAGAAAGATGGGTTGGCTCTTTATAGGGAAGTTGTGTTCCAAGATTACATGAACAACTTCTTTGGGAATGCTCATGCTGGAAAGAAGTCTCTTGATTTTGCAAGGATCAACTAG 1089 0.4298 MTSSFNTSNSLYDFIVRDGNGVKGLVDSGVLDVPERYIQPPEERIKKEDSRICDAPPIDLSKLNGAEHEKVVDEIVRAAETLGFFQVVNHGVPLELLESLKDAAHTFFNLPPEKKVVYCTGVSPSPKVKYGTSFVPEKEKALEWKDYISMVYNSDKEAIQYWPNQCKEFALEYLKLSSKMVRDIVEILIGKLGVVIEDSKVESLLGMKMVNMNYYPACPNPELTVGVGRHSDMGAITVLLQDGIGGLYVKVEEENDAGKGEWLEIPPIPGALVINIGDTLQILSNGKFKSAEHRVRATSTQSRVSVPVFTAPIATERIGPLPEVVKKDGLALYREVVFQDYMNNFFGNAHAGKKSLDFARIN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01364 362 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 164 IPR026992 -
Cca10g01364 362 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 312 IPR005123 -
Cca10g01364 362 SUPERFAMILY Clavaminate synthase-like 21 350 - -
Cca10g01364 362 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 3 352 - -
Cca10g01364 362 PANTHER SCOPOLETIN 8-HYDROXYLASE 3 352 - -
Cca10g01364 362 Pfam 2OG-Fe(II) oxygenase superfamily 209 311 IPR044861 -
Cca10g01364 362 Gene3D - 11 343 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01364 Cca-Chr10 19117417 19119435 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01364 21 361 Glycosyltransferase AT5G59530 34.000 1.29e-60 197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01364 10 19117417 19119435 Cca10g01364 10 19117417 19119435 ECH