Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01334 ATGCTACCATCATCCACTGTCCTATCCCTCGCCGGCGCCGGCGTGCCGGCGACGTTTTCCGGCAAACTGGGTCACCGCGAATCCAAGTTTGCCGCCAGACCCAGAAAGGTTCTCAAATGTTCGTGCATAAAGGGGTTTCCTTTACATCAACACACCATCTATGGTTTGAGTTCGAAGAAGAGAAACTCACTTTCCAGCTTCGCATTCGGTAAAAAAGCAGAGGATAGCTTTTTCTCGGATGTAAATGAAGACACTGATGAAATGTATGACGACTTAATTAATAATTATGGAAAAGTGGTATTTAGTAGAAAAGACAAAAAGCCTGCTAGTGCAGAGATTGATGATGATGCTGAAAGCCTGTCATTTGCTGTGGAATTAGCCACGGTTGCAAGTGAGGTTAAGGCAGGAGATATAAAGGTCTTGTTTGTGAAGCCACTTGTTTACTGGACTCGATTTTTTATCATAGCTACTGCATTTTCTCGTCCCCAGATTGATGCTATCGGGTCCAGAATTAGAGATCGAGCTGAGAAGAAATATGGAAAAATTCCAACTGGAGACACAAAACCCAACTCGTGGACCCTGTTGGACTTTGGTGATGTAGTTGTCCACATCTTCCTTCCTTCACAGAGAGCTTTCTACAATTTGGAAGAGTTTTATGGTAATGCAACACCAGTAGAGCTTCCTTTTGAAAATCAACCACCACCATTTCGCAGTTGA 717 0.4365 MLPSSTVLSLAGAGVPATFSGKLGHRESKFAARPRKVLKCSCIKGFPLHQHTIYGLSSKKRNSLSSFAFGKKAEDSFFSDVNEDTDEMYDDLINNYGKVVFSRKDKKPASAEIDDDAESLSFAVELATVASEVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDRAEKKYGKIPTGDTKPNSWTLLDFGDVVVHIFLPSQRAFYNLEEFYGNATPVELPFENQPPPFRS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01334 238 Gene3D Beta Polymerase, domain 2 118 228 IPR043519 -
Cca10g01334 238 TIGRFAM rsfS_iojap_ybeB: ribosome silencing factor 126 219 IPR004394 -
Cca10g01334 238 Pfam Ribosomal silencing factor during starvation 125 219 - -
Cca10g01334 238 PANTHER PROTEIN IOJAP, CHLOROPLASTIC 4 236 - -
Cca10g01334 238 Hamap Ribosomal silencing factor RsfS [rsfS]. 117 220 IPR004394 -
Cca10g01334 238 PANTHER IOJAP SUPERFAMILY ORTHOLOG 4 236 IPR004394 -
Cca10g01334 238 SUPERFAMILY Nucleotidyltransferase 119 229 IPR043519 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01334 10 18341870 18348183 Cca10g01334 10 18341870 18348183 ECH