Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01330 ATGGCAGGCAGTGGCCTGCCATCTTTGGGTCGTGTGAAGCTTACTGATTTAGTCCCTTCAGACGGGTTGCCTTCTGATTCTTATAAAATATCAGTTTCTATTTTGTCACAATCTCTGGCTCAGTTTTCGGCAGTCATCATCCAGTTTCCAGCAAGTGATGGGGCTCTTCTGAGATCTGGGATAGAATCTGCTCGCCTCTATTTCCACCAAAGGGAAACATATCCGCCTGCAGATATAATCCATACAAATGAGTCTCGTGAGTGGTGCAAAACATCTGGTTATTATACAGATTCTCATTTGTGGCAAGAAACATATGACTATAGACCAGGATTGACTCCTTCAGAACCTAATGATTCAATTGAGTTTCCTCCGGCGGGTTTGCCAGATATCTTTGCTTTATTTGGAAAAGCAGCAAGAGATATTCTGGATGCAATTGGCTACCATTTGAATTTGCGCAGCTCTCCATTTGTAGAAATACTGGATAATGTTCCCCTGAGAAATAGGGAAATATCATCTTCAGTCTTGTCTGTTTGCTGTCATGCAAGGCCATCATTTCAGGGGTCACAGCATCATAATATAACTACTCAGGAGGATAGCCAATTGATTATGTATCCTGACCATGATCACCAAGTTGATAAAAGCTTGCTATCACTTGTTAAGTCTGACAGGGCAGGTTTACATATAAGGGACTTTCAAGGGCGGTGGATTCTTGTGGATGGAGATCTGGGACCTCAAGAAGCTATTGTTTATCCTGGGCTTGCTCTTTACCAAGCAACTGCAGGATATGTAAACCCTGCATTACACAAGACTGAGATTAATATGGAGGCTAATATGTATGGACGATGTTCTTTAGCCTTCAAACTTTTGCCCAAGTCAATGACCAGTTTTGATTGTTCAGAAATGCGAGCAGCAGGTTATGGAATTGAAGCTCAGTTCCAGCTTCCTGTTCCGGTGGATGATTTTATGCAAAGATCTCATCCAACAGATAGTCTCTTTAACAGGCCTGGTTTCCAGTGCTTTAATTTCCAACCAACGCATGATGTCAAGGATATTGCTGATAAGAAAGGCATCAAGCTGCGGTTTTGTAATCTGAAGGAATGTGAAAGTCACATTCACAGTGTAGATAGCCCATGTGCAAATATACGGGTGGAGATAGGGTGGCCGCTTGGTGTTCCATTTGTTCATCCCCATGATTTACCTAATAAGGCAAAGCTGGGTTTTCTTGAAGCATATGAACCTGGTTGGACAGAAGCCCATCAAAACTCAGACAGGCTAGTCAACACTCGGCTAACTTTAACTGAATCAGTCCCCCTGATTTCCAACATATGGGCAACATATGATCAGATTGTGAAGGTCTAA 1359 0.4253 MAGSGLPSLGRVKLTDLVPSDGLPSDSYKISVSILSQSLAQFSAVIIQFPASDGALLRSGIESARLYFHQRETYPPADIIHTNESREWCKTSGYYTDSHLWQETYDYRPGLTPSEPNDSIEFPPAGLPDIFALFGKAARDILDAIGYHLNLRSSPFVEILDNVPLRNREISSSVLSVCCHARPSFQGSQHHNITTQEDSQLIMYPDHDHQVDKSLLSLVKSDRAGLHIRDFQGRWILVDGDLGPQEAIVYPGLALYQATAGYVNPALHKTEINMEANMYGRCSLAFKLLPKSMTSFDCSEMRAAGYGIEAQFQLPVPVDDFMQRSHPTDSLFNRPGFQCFNFQPTHDVKDIADKKGIKLRFCNLKECESHIHSVDSPCANIRVEIGWPLGVPFVHPHDLPNKAKLGFLEAYEPGWTEAHQNSDRLVNTRLTLTESVPLISNIWATYDQIVKV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01330 452 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 348 428 - -
Cca10g01330 452 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 1 347 - -
Cca10g01330 452 Gene3D - 62 327 IPR027443 -
Cca10g01330 452 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 1 347 - -
Cca10g01330 452 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 348 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01330 Cca-Chr10 18304559 18308888 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01330 10 18304559 18308888 Cca10g01330 10 18304559 18308888 ECH