Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01327 ATGGTGGATATGGATGGGTTTGGAGCTGGGGGTGGCGTTGATGGAGCTCCCAACACACAGAATCTCAGAGAATTGGGAAATGCTCCCTCAGGGGGTGCAGTTTTTGATGCATCACAATATGCGTTCTTCGGTAAAGATGTTGTCCAGGAAGTTGAGTTGGGAGGGTTAGAAGAGGATGACATTGTGCCTCCTGTTGAGTCTAATGAGGAGGAGTTCTTTTTCAATAGAGAAAGAGAAGAGGCTGAGGATGTAAGATCTCTTTCTGATATTGATGATCTTACTACCACTTTTTTGAAGTTGAACAAGTCTGTGAGTGGACCAAGAAGTGCAGGTGTGATTGGTGAACGAGGATCAAGAGAAAATTCTATTTCTGAATGGTCACACAGGGAAGATAGTCTTAACTGGTTTGATCAGAATGCTTATGATAGTGAAGGTTCTATGGATGGCAAAAGATGGTCATCACAGCCCCATTCTTCCCTAGCTCATTTACATGATTCAAAGCCCTTGTACAGAACATCCTCATACCCCGAGCAGCAAAGGCAGGAGCAACACTACCACCTCCAACATTGCTCTAGTGAACCAGTTCCTAACTGGCTTGATCAGCAATTTTATGAAACAGAAACTGCTCATGATCAAGATGGCAAACGATGGTCATCACAGCCACATTCCTCCATTGCACATTTACAAGAGTCAAAACCCTTGTACAGAACATCTTCATATCCTGACAAACAACAGGAGCTTACTCGTTTTTCTAGTGAACCAATTTTGGTACCAAAATCTTCATTTACTTCTTATCCTCCCCCTGGTGGTCTATCTCAGCTGGGTTCCCCAAGTCATAGTACAGGGCACTTAAACATGCCTTATCATACTGGAGCAACTCAGATAGCACTATCATCTCAAAATCGTTCTCATTTCTCCAATTCTGCACTACAGTCAAGTGCATTAAACCTTGGGTCACATTTTGGTGGTAACACTCGGCAATTTCCTACCAGTTCCTCACTTAATCAGCGACTAAAGAATCAATTGGTGAACCAGGCAGGGTTGTATCCTGGAGATCATTCAAATCTCCTTAGTAATATGTTGCAGCAACAATTACACCTTCATAATGGATCAGTATCTCCTCATTTGATGACTCAATTGCAACAACAGCAGCATAGACTGCATCATCCTGTTCAGCGATCTGCAGGCTACTTATCAGGCTTCCAGTCCCATTTATTTAATCCCCACCTTTCCTCTGGCTCATCTGTAATGAGCAAATATGAACATGTGCTTGGCCATGCTGATGGTAGAGATCATAGACCAAAATCAACTCATAAAGGTAAACATAGTCTTCGTTTTTCCCAACATGGTTCTGATGCCAGTAGCCAGAAGAGTGACAGTGGTTCATTTCAGTTTCGGTCCAAGTATATGACAAGTGATGAAATTGAGAGCATTCTTAGAATGCAACTTGCTGTGACTCATAGTAATGATCCTTATGTAGACGACTATTACCACCAAGCTTGCCTAGCAAAAAAACCTTCTGCGGCTAAGTTAAAACATCCATTTTGCCCAACCCAAATAAGGGATCTTCCTTCACGAACCCGTTCTAATTCTGAGCCACTTGCATTTCTTCAGGTTGATGCTCTAGGGAGGGTTTCATTTTCGTCTATTCGTTGTCCTCGCCCTCTTCTTGAGGTGGATCCTCCAAACACCTCTGTTGGCTCTGATCAAAAGATTTCAGAGAAGCCCCTTGAACAGGAACCTAGGTTTGCTGCCAGAGTCACAATTGAGGATGGTCTTTGTCTTCTTCTTGATGTTGAAGATATTGATCGTTACCTACAGTTTAATCAGCCACAAGATGGGGGATCACAATTACGACGAAGAAGGCAGGTCCTGTTGGAAGGACTAGCAACTTCACTTCAACTTGTTGACCCACTGGGAAAGAATGGACACAAAGTTGGGCTTGCTGCTAAGGATGATCTGGTTTTCTTACGATTGGTATCTCTTCCCAAGGGACGTAAGCTCCTTGCAAAGTATCTTCAGTTGCTTCTCTCTGGTAGCGAGCTTATGAGGATAGTCTGCATGACAGTCTTTCGCCATTTAAGATTCTTATTTGGTGGTCTCCCCTCAGATCCGGCAGCTTCAGAGACTACAAATAACCTTGCCAAGGTGGTTTGCAAATGTGTCAGAGGAATGGATCTAGGTGCTCTCAGTGCTTGTCTTGCAGCAGTTGTTTGTTCTGCAGAGCAGCCTCCTCTACGACCCATTGGAAGCACTTCTGGAGATGGTGCTTCCCTTATTTTAATATCCGTTCTTGAGAGGGCCACTGAACTTCTAACTGATCCACATGCTTCTTGCAACTACAACATTAGTAATCGTTCATTTTGGCAGGCTTCATTTGATGAATTCTTTGGCCTTCTCACCAAGTATTGCATGAACAAATATCATAGTATCATGCAATCCATGCTTATACAAAGTACCTCGAATGTGGATGATGTGGGACCAGATGCTGCCAAAGCTATCAGTAGAGAAATGCCTGTTGAACTCTTGCGCGCCAGCCTCCCTCACACTGACGACCGCCAGAGGAAGTTATTACTGGATTTCGCACAGCGCTCCGTGCCTGTGGTTGGGTTTAACAGCAACACGGGGGGTAATGGTGGTCATGTGAACTCAGAAACAGTGCTAAGTTGA 2670 0.4393 MVDMDGFGAGGGVDGAPNTQNLRELGNAPSGGAVFDASQYAFFGKDVVQEVELGGLEEDDIVPPVESNEEEFFFNREREEAEDVRSLSDIDDLTTTFLKLNKSVSGPRSAGVIGERGSRENSISEWSHREDSLNWFDQNAYDSEGSMDGKRWSSQPHSSLAHLHDSKPLYRTSSYPEQQRQEQHYHLQHCSSEPVPNWLDQQFYETETAHDQDGKRWSSQPHSSIAHLQESKPLYRTSSYPDKQQELTRFSSEPILVPKSSFTSYPPPGGLSQLGSPSHSTGHLNMPYHTGATQIALSSQNRSHFSNSALQSSALNLGSHFGGNTRQFPTSSSLNQRLKNQLVNQAGLYPGDHSNLLSNMLQQQLHLHNGSVSPHLMTQLQQQQHRLHHPVQRSAGYLSGFQSHLFNPHLSSGSSVMSKYEHVLGHADGRDHRPKSTHKGKHSLRFSQHGSDASSQKSDSGSFQFRSKYMTSDEIESILRMQLAVTHSNDPYVDDYYHQACLAKKPSAAKLKHPFCPTQIRDLPSRTRSNSEPLAFLQVDALGRVSFSSIRCPRPLLEVDPPNTSVGSDQKISEKPLEQEPRFAARVTIEDGLCLLLDVEDIDRYLQFNQPQDGGSQLRRRRQVLLEGLATSLQLVDPLGKNGHKVGLAAKDDLVFLRLVSLPKGRKLLAKYLQLLLSGSELMRIVCMTVFRHLRFLFGGLPSDPAASETTNNLAKVVCKCVRGMDLGALSACLAAVVCSAEQPPLRPIGSTSGDGASLILISVLERATELLTDPHASCNYNISNRSFWQASFDEFFGLLTKYCMNKYHSIMQSMLIQSTSNVDDVGPDAAKAISREMPVELLRASLPHTDDRQRKLLLDFAQRSVPVVGFNSNTGGNGGHVNSETVLS 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01327 889 MobiDBLite consensus disorder prediction 218 236 - -
Cca10g01327 889 PANTHER PROTEIN PAT1 HOMOLOG 18 195 - -
Cca10g01327 889 PANTHER PROTEIN PAT1 HOMOLOG 196 868 - -
Cca10g01327 889 MobiDBLite consensus disorder prediction 427 462 - -
Cca10g01327 889 MobiDBLite consensus disorder prediction 1 27 - -
Cca10g01327 889 MobiDBLite consensus disorder prediction 144 163 - -
Cca10g01327 889 MobiDBLite consensus disorder prediction 207 236 - -
Cca10g01327 889 MobiDBLite consensus disorder prediction 447 462 - -
Cca10g01327 889 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 196 868 IPR039900 GO:0000290
Cca10g01327 889 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 18 195 IPR039900 GO:0000290
Cca10g01327 889 MobiDBLite consensus disorder prediction 258 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01327 Cca-Chr10 18218440 18228687 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01327 10 18218440 18228687 Cca10g01327 10 18218440 18228687 ECH