Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01316 ATGGACGAGATTAGGTATTCATGCAATAGCGCTCGCGAAACTCTCCAATGGATCAACGAGATTATCCAATTTCTCACTCCTTACTCTTCCTTAATCAACGACCACGTAGTTAATTTCTTCAAGGATAGGCTATGGGAGAATGTTGACGCCGAATGGATCGAATGCCTGCGCCGAGAGCCTGTTCAGAATCTTCTCCTCATACCTTCTGGTGCACTACAGGATCAATGGCCAATTTCTCTTAAGGAGTTCATCAGAAAATTAAGGTCTATGGTATTTTGTCAAGAACAAGCTGATATAAACATGGCATTACCTGGCCTGCAGATGACTTCACTTAACAGTGTTCTTGCTCAGGGCATGAATGTAAAGAAAAGACACGAGGTAGAAGTTCTTTCTGCTGTTATAAGTACTGTTGCAAAAAGTGTGAGAGCTCATGCCATTGTTGACGTTGGTGCTGGTCAGGGTTATCTTGCACAAGTACTGGCATTTCAATATCAGCATCCTGTCATTGCAATTGATGCATGTTCTCATCATGGGAAGGTTACTAATGCACGGGCAGAACGAATTAAAAAGCACTATACATCACAATTGATAAAATCTGGATCAGGCATGCGGAGTTTGAATGTGCCAAAGACAATCACGTGTCGCGTATTGTCCATTGACACATTAAAAACCTTGGTTGAAACATCAATTCCTGGAGATGATGTTGAGCAATCCAGGTTAAAGGGAGAAAATCAAGATCAAGGGAAACTACATTGGCTCAGTGATGCAAACAAAAAGCCTTCTACTGTTCTTGCTGGGCTTCATGCCTGTGGTGACCTTTCGGTGACTATGCTGAAGACTTTCGTAGAGTGTAAAGATGTTAAAGCTGTTGTTAGTCTTGGTTGCTGTTACAATTTATTATCTGAAGAAATGATTAAGGGTGATGAATCTCAGTGTGGTTTTCCAATGAGTCATGCTGTAAGATCCACTGGCTTATCACTTGGAAGAAGTGCACGTGATCTTGCTTGCCAGAGTGCAGAGAGATGGAGGAGCCTGGACATGCATGCTGGCATTCACAACTTTGAGCTGCATGCTTTTCGGGCAGCTTTTCAAATGGTTCTTTCTAAATATTATCCGGAAATAGTGATGAGTACTCCTTCAATTGGGCGTAAAGGGAAGGCTCTTCGTCGGCGACATCAGAGGAGATCTGCTGAATCCCAGCTGCATCTTAAAGGAAGTACTTGCCACATGGGACAAATTTTACCTCCTGTAGTTCCTTCAGAGTCAGAAACTGAAGGAATTTTGGGCTCTGCATCAGAAATACAAACCTTAACTGGTGAAATTCCTTCTAATGAAAGGGCTGGATGTGAAGGGATTAAATCCGATGACAAATTTTCACATTTTGAGAATTTCTGCCACTCTGGGTTGTCTCATCTTGGAATTAAACATTCAAATGATATAAACCTTCAAGGCATATGGAAGGAAGCAGAACCATTTTCTgtgctaactcttcatggattcctgattctggtgcttcatttcatgttactggacaccaatgaggttcttcttcaaggtgttgttggtgctgatgggctttattcttttcctcatctaaagctccaagATTCTCCTGTTGCTGAAAGGATACAATACATGCCAGAGTTCTCTTTCCAGACAAACAAAAGTGTGAAGCCAGACGGTGAAAGCATGAATGACTCAATGTTGCTTGGTTGGAGTGGAGTTTCTTGGTTAACAAGGCCACAATGA 1749 0.3894 MDEIRYSCNSARETLQWINEIIQFLTPYSSLINDHVVNFFKDRLWENVDAEWIECLRREPVQNLLLIPSGALQDQWPISLKEFIRKLRSMVFCQEQADINMALPGLQMTSLNSVLAQGMNVKKRHEVEVLSAVISTVAKSVRAHAIVDVGAGQGYLAQVLAFQYQHPVIAIDACSHHGKVTNARAERIKKHYTSQLIKSGSGMRSLNVPKTITCRVLSIDTLKTLVETSIPGDDVEQSRLKGENQDQGKLHWLSDANKKPSTVLAGLHACGDLSVTMLKTFVECKDVKAVVSLGCCYNLLSEEMIKGDESQCGFPMSHAVRSTGLSLGRSARDLACQSAERWRSLDMHAGIHNFELHAFRAAFQMVLSKYYPEIVMSTPSIGRKGKALRRRHQRRSAESQLHLKGSTCHMGQILPPVVPSESETEGILGSASEIQTLTGEIPSNERAGCEGIKSDDKFSHFENFCHSGLSHLGIKHSNDINLQGIWKEAEPFSVLTLHGFLILVLHFMLLDTNEVLLQGVVGADGLYSFPHLKLQDSPVAERIQYMPEFSFQTNKSVKPDGESMNDSMLLGWSGVSWLTRPQ 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01316 582 PANTHER CGI-41 METHYLTRANSFERASE 5 497 - -
Cca10g01316 582 Pfam Methyltransferase domain 122 303 IPR025714 -
Cca10g01316 582 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 5 497 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01316 10 18055697 18073686 Cca10g01316 10 18055697 18073686 ECH