Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01294 ATGGCAAACGAGGTTGTTCTGTTGGAAACATGGGCAAGCATGTATGGGATCAGAGTTAGAATTGCATTAGCTGAAAAGGGTGTTAAGTATGAATGCAAGGAAGAGAATCTGAGGAACAAAAGTTCTTTGCTTTTGCAGATGAACCCTATTCACAAGAAAATTCCAGTTCTCATTCATAATGGCAAACCCATTTGTGACTCTGCAATTATAGTGCAGTACATCGATGAGGTCTGGAGTCACAAGGCTCCACTTATGCCCTCAGACCCTTATGAGAGAGCTCAAGCCAGATTTTGGGTAGATTACATTGACAAAAAGGTGTATGATACTTCTAGGAAAATGTGGCTTTCTACAGGTGAGGAGCACGAGACATGGAGGAAGGAGTTAATCTCTGTTTTTAAGCAATTAGAAGAGACATTGGGTGACAAGCCTTTTTATGGGGGCGACACTTTTGGGTTTGTGGACGTTGGTTTGATCTCTTTCTACAGTTGGTTTTATAGTTTTGAGATATATGGCAACTTCAAAATGGAAGCAGAATGTCCTAAACTTGTAGCTTGGGTCAAGAGATGCATGCAAAGAGAGACTGTGTCCAAAAATCTTCCTGATGAGAAAGAGATCTATGATCATGCTGAGGCAAGCAAGAAGGCACTTGAATTGAAATAA 660 0.4076 MANEVVLLETWASMYGIRVRIALAEKGVKYECKEENLRNKSSLLLQMNPIHKKIPVLIHNGKPICDSAIIVQYIDEVWSHKAPLMPSDPYERAQARFWVDYIDKKVYDTSRKMWLSTGEEHETWRKELISVFKQLEETLGDKPFYGGDTFGFVDVGLISFYSWFYSFEIYGNFKMEAECPKLVAWVKRCMQRETVSKNLPDEKEIYDHAEASKKALELK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01294 219 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Cca10g01294 219 Gene3D Glutaredoxin 1 87 - -
Cca10g01294 219 Gene3D - 88 219 - -
Cca10g01294 219 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
Cca10g01294 219 CDD GST_N_Tau 5 78 - -
Cca10g01294 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Cca10g01294 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cca10g01294 219 Pfam Glutathione S-transferase, C-terminal domain 124 188 - -
Cca10g01294 219 CDD GST_C_Tau 89 211 IPR045074 GO:0004364|GO:0006749
Cca10g01294 219 SUPERFAMILY GST C-terminal domain-like 76 211 IPR036282 -
Cca10g01294 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Cca10g01294 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Cca10g01294 219 PANTHER GLUTATHIONE S-TRANSFERASE PARC-RELATED 3 211 - -
Cca10g01294 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 211 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01294 Cca-Chr10 17712209 17713705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01294 1 214 Glutathione S-transferase Gene Family AT1G78380 62.150 1.37e-105 301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01294 10 17712209 17713705 Cca10g01294 10 17712209 17713705 ECH