Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01290 ATGGCAGATGAGATTGTTCTGCTAGATTTCTGGCCAAGTCCTTTTGCGGCGAGGGTCAAGATTGCCCTTGCTGAAAAGGCCATCAAGTATGAGTCCAAAGAAGAGGACGTGATCAGTAACAAGAGTCCTCTGCTCCTCCAAATGAACCCGGTTCACAAGAAAATCCCAGTTCTCATCCACAATGGCAAGCCCGTTTGTGAATCTCTCATTGCTGTTCAGTACATTGAGGAGGTTTGGAATGACAGAAATCCTTTGTTGTCTTCTGATCCTTACCAGAGAGCTCAGGCTAGATTCTGGGTTGACTATGTTGAAAAGATGATATATGAACATTGGAGCAAGTTTTGGACATCAAAAGGAGAAGAAATAGAAATTGCCAAGAAGGAATTCATAGAAGCCCTTAAATTGTTGGAGGATCAACTAGGAGACAATACTTATTTTGGAGGAGACAATCTTGGTTTTGTGGACATAGCACTTGTTCCATTCTACTCTTGGTTCAAAGTCTATGATACTTTGGGCTACCTCAACTTAGAGAGTGACTGCCCCAAGTTTATTGCTTGGGTCAAGAGGTGCTTGCAGAAAGAGAGTGTTTCTAAGTCTCTTCCTGATCAGTATAAGCTTCACGATGTATACTATTCTTTCCATGGACGCCCCCACTCCAATCACCACCTCCCTCCACTGAACGCCCTCGCCGTCTACGACCTTCGCTCCCGCTACCGCCTCTTCCTCTCCCCGCTCCCCTCTAAAGACGTTGACGTGACAAACGATGTCGCCGTGGACCACTATGGCAACGCGTTCGTGATGAACTCCAGCGAAAACTTCATTTGGAAGAATCCTTCCAACGGCAACGCACCTTACGGTTTCGTAGGGTTGAATGGAATCGCCTACGTGAGCAAGAGATACCTCTTAGTGGTGCAATCAAGCAGCGGGAAGGTTTTCAAGGTAGACGCAGTGGACGACACAATGAGGAAGGTGTTGTTGAACGAGGATCTAGTAGGCGCGGAAGACATTGCGGTGAGGAAGGACGACGTGGCGGAGGTGATTTCACCGATGAAGGTACTGTGGTTGATGAAGAGCGATGATAACTAA 1086 0.4696 MADEIVLLDFWPSPFAARVKIALAEKAIKYESKEEDVISNKSPLLLQMNPVHKKIPVLIHNGKPVCESLIAVQYIEEVWNDRNPLLSSDPYQRAQARFWVDYVEKMIYEHWSKFWTSKGEEIEIAKKEFIEALKLLEDQLGDNTYFGGDNLGFVDIALVPFYSWFKVYDTLGYLNLESDCPKFIAWVKRCLQKESVSKSLPDQYKLHDVYYSFHGRPHSNHHLPPLNALAVYDLRSRYRLFLSPLPSKDVDVTNDVAVDHYGNAFVMNSSENFIWKNPSNGNAPYGFVGLNGIAYVSKRYLLVVQSSSGKVFKVDAVDDTMRKVLLNEDLVGAEDIAVRKDDVAEVISPMKVLWLMKSDDN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01290 361 SUPERFAMILY NHL repeat 227 341 - -
Cca10g01290 361 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 211 IPR045073 -
Cca10g01290 361 CDD GST_C_Tau 90 206 IPR045074 GO:0004364|GO:0006749
Cca10g01290 361 SFLD Main.3: Omega- and Tau-like 2 214 IPR045073 -
Cca10g01290 361 SFLD Main (cytGST) 2 214 - -
Cca10g01290 361 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Cca10g01290 361 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 211 IPR010987 -
Cca10g01290 361 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Cca10g01290 361 SUPERFAMILY GST C-terminal domain-like 77 214 IPR036282 -
Cca10g01290 361 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 211 - -
Cca10g01290 361 Gene3D Glutaredoxin 1 88 - -
Cca10g01290 361 Gene3D - 89 216 - -
Cca10g01290 361 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
Cca10g01290 361 CDD GST_N_Tau 5 79 - -
Cca10g01290 361 Pfam Glutathione S-transferase, C-terminal domain 121 189 - -
Cca10g01290 361 Gene3D - 237 349 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01290 Cca-Chr10 17662507 17690836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01290 1 206 Glutathione S-transferase Gene Family AT1G78340 63.107 2.94e-96 283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01290 10 17662507 17690836 Cca10g01290 10 17662507 17690836 ECH