Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01258 ATGACTGACGAAGACAAACCTAAAGCCTTCTccgccgaccaccaccaccaccaccctccgccgccgccgcaaccCTATCCAGCCGCCCAGTACGGCACCTTCCAAGGCGTCTCCAACTACCCTCCGCCGCCGCCGCAGCAGCACCCCGCCATCGGCTTTCCTCAGCCCGTTCCGCCGCCCGGCGTCGGCGACTCCTCCGCCCCTCCTCCGCCCTATTACTCCGGGTACCAAGCAGTTCCCGGTTATGCTGTTGCTGAAGGAAGACCTGTAAGAGAACCCCGCCTTGGTTGCTGTGGCATTGGTTGCGGCTGGTGTCTGTTTATATTAGGCTTCTTTCTTGCTGGTATTCCATGGTATGTCGGAGCAATAATTATGCTTTGTTCCAGAGTAGACTATCGGGAGAAACCTGGATATGTTGCTTGTATAGTTGCTGCTGTTCTGGCTACAATTGCGATTATTTTTGGTGTGACAAAGGGTGCAGAGGACTGGTAG 492 0.4959 MTDEDKPKAFSADHHHHHPPPPPQPYPAAQYGTFQGVSNYPPPPPQQHPAIGFPQPVPPPGVGDSSAPPPPYYSGYQAVPGYAVAEGRPVREPRLGCCGIGCGWCLFILGFFLAGIPWYVGAIIMLCSRVDYREKPGYVACIVAAVLATIAIIFGVTKGAEDW 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01258 163 MobiDBLite consensus disorder prediction 1 67 - -
Cca10g01258 163 MobiDBLite consensus disorder prediction 38 67 - -
Cca10g01258 163 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 163 IPR044804 -
Cca10g01258 163 MobiDBLite consensus disorder prediction 1 20 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01258 3 163 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.488 4.58e-26 96.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01258 10 16792766 16796336 Cca10g01258 10 16792766 16796336 ECH