Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01257 ATGAGTGCCACAAGTGCAACGTGGTTGGTGGCAGTGGTGGGTGTGGTGGTGGTGGTGGTGTGGAGGGTGGTGGAGTGGGTGTGGGTGAGGCCAAAGAGGGTGGAAAAGGTGTTGAGAACGCAAGGCTTCGATGGCAACCCCTATAGGGTTTTGATTGGGGACACAAGGGAAATGTACAGGGTGCTCCTGCAAGCTGCAAAATCTCAAAAACCCACTAATTTTCTCTCCGATCACAACGACGTAGCACCGCATCTCACAACCTTTAACCATCACATCGTCAACAAATTCGGGAAAAAATCATTTTCATGGGAAGGTCCTACACCAAAAGTGATCATCACAGAGCCTGAGCATATCAAAGAAATCTTCAACAAGATGCAAGACTTTGGGAAGCCCAAATTGAGCCCCATTTTCAAGTTGTTAGGTACTGGACTTGCAAATTTAGAAGGCGACACATGGCGGATGCACCGAAAGATTATCAATCCTGCTTTCCATTTAGAAAAACTCAAGGTTATGTTACCAATATTTTCAAGATGTTGCGATGATATGGTTTCCAAATGGGAAGAGATGTTATCTTCAGATGACAAATGTGAGATTGATGTATGGCCTTACCTTCAAAGTTTGACCTGTGATATTATTTCTAGAACAGCATTTGGAAGCAGTTATGAAGAAGGAAAAAGAATATTTGAACTTCTGAAAGAGCAAGGTGGACTTATTATGAAATCACGCAGCGTTTACATTCCAGGATGGTGGTTGCTACCAACAACTACACATAGGAGAATTAAACAAATTGATACTGAAATACGAGCATCACTTAAAGGTATCATCAACAAACGAGAGGAAGCAATGAAGGCCGGTGAAGTCTTGAACAATGACTTATTGGGCATGCTTTTGGAATCAAATCGTATGGAATCACAAGAACATGGAAACAATAAGAACCTTGCAATGACTAACCAAGAAGTAATCGAAGAATGCAATGCATTCTACATAGCAGGACAAGAAACCACATCAGTTTTGCTGGTTTGGACAATGATATTGCTGAGTAGGCATCCTGATTGGCAAGCACGTGCTAGGGATGAAGTATTGGAAGTTTTTGGTAACCAAAAACCAGACTATAATGGGCTAAGTCACCTCAAAATTGTAACCATGATTTTATACGAGGTTTTAAGGTTGTACCCACCTGTAGTTTATTTCAGTCGAGCCATCTCAAGGGATGTGAAACTTGGAAACCTTTCTCTACCAGCAGGAGTGCAAGTTTCCATACCAATCTTGTTGATCCACCATGATCGTGATATCTGGGGTGATGATGCTACTGAGTTCAAACCAGAAAGATTTTCTGAAGGAGTTGCAAAGGCAACAAAGGGCCAAGTCACTTTTTTCCCATTTGGATGGGGTCCTAGAGTGTGCATAGGCCAAAATTTTGCTCTATTAGAAGCAAAATTGGTTTTGTCATTACTTCTACAACGGTTCTCATTTGAGCTTTCTCCGGCCTATACACATGCTCCAGCCACTGTGCTCACTCTTCATCCAAAACATGGGGCTCATATCATCTTACGCAAGTTGTAG 1563 0.4216 MSATSATWLVAVVGVVVVVVWRVVEWVWVRPKRVEKVLRTQGFDGNPYRVLIGDTREMYRVLLQAAKSQKPTNFLSDHNDVAPHLTTFNHHIVNKFGKKSFSWEGPTPKVIITEPEHIKEIFNKMQDFGKPKLSPIFKLLGTGLANLEGDTWRMHRKIINPAFHLEKLKVMLPIFSRCCDDMVSKWEEMLSSDDKCEIDVWPYLQSLTCDIISRTAFGSSYEEGKRIFELLKEQGGLIMKSRSVYIPGWWLLPTTTHRRIKQIDTEIRASLKGIINKREEAMKAGEVLNNDLLGMLLESNRMESQEHGNNKNLAMTNQEVIEECNAFYIAGQETTSVLLVWTMILLSRHPDWQARARDEVLEVFGNQKPDYNGLSHLKIVTMILYEVLRLYPPVVYFSRAISRDVKLGNLSLPAGVQVSIPILLIHHDRDIWGDDATEFKPERFSEGVAKATKGQVTFFPFGWGPRVCIGQNFALLEAKLVLSLLLQRFSFELSPAYTHAPATVLTLHPKHGAHIILRKL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01257 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 516 - -
Cca10g01257 520 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01257 520 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01257 520 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01257 520 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01257 520 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 11 516 - -
Cca10g01257 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Cca10g01257 520 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01257 520 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01257 520 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01257 520 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01257 520 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01257 520 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01257 520 SUPERFAMILY Cytochrome P450 83 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01257 520 Pfam Cytochrome P450 91 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01257 520 Gene3D Cytochrome P450 29 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01257 Cca-Chr10 16774614 16778771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01257 1 520 Cytochrome P450 AT3G14690 52.299 0.0 586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01257 10 16774614 16778771 Cca10g01257 10 16774614 16778771 ECH