Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01256 ATGTATATTTGTAGGTTTCTACCTACCAATACCCATAGGAGGATGAAGGAAATTGACAAAGATATAAAAGCTTCACTCAAGGATATGATTAACAAGAGGGAGAAAGCACTAAAGGCGGGTGAAGCCACTAAGAATGACCTATTAGGTATACTTTTGGAGTCAAATCACAAGGAAATTGAAGAACACGGAAACAATAAGAATGTTGGAATGAGTCTTAAAGAAGTAATCGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAAACCACTTCAGTTTTGCTTGTTTGGACGATGGTGTTGTTGAGTAGGTACCCTGATTGGCAAACACGTGCAAGAGAGGAAGTCTTGCAAGTCTTTGGGAACCAAAAACCAGATTTTGATGGACTAAGTCGCCTAAAGATTGTTACCATGATTTTGTACGAGGTTCTTAGGTTATATTCACCGGTAGTTGATCTTACTAGAATAACTCACAAAGATGTGAAACTCGGAAACATATTTTTACCTGCTGGAGTGCAGATTTCCTTACCAACAATTTTGCTCCACCATGATTGTGAACTGTGGGGTGATGATGTTAAGGAGTTCAAACCTGAGAGATTTTCTGAAGGGATTCTTAAGGCCACAAATGGAAGAGCTTCATTTTTTCCCTTTGGAGGAGGTCCTAGAATATGCATTGGACAAAATTTTGCCTTGTTGGAAGCAAAGATTGCTTTGTCAATGATTTTACAACGTTTCTCGTTTGAACTTTCTCCTACCTATACTCATGCTCCAAATTCTGTGATTACTCTTGAGCCTCAATATGGTGCTCATGTCATTCTACGTAAAGTGGAAATATAA 834 0.3873 MYICRFLPTNTHRRMKEIDKDIKASLKDMINKREKALKAGEATKNDLLGILLESNHKEIEEHGNNKNVGMSLKEVIEECKLFYFAGQETTSVLLVWTMVLLSRYPDWQTRAREEVLQVFGNQKPDFDGLSRLKIVTMILYEVLRLYSPVVDLTRITHKDVKLGNIFLPAGVQISLPTILLHHDCELWGDDVKEFKPERFSEGILKATNGRASFFPFGGGPRICIGQNFALLEAKIALSMILQRFSFELSPTYTHAPNSVITLEPQYGAHVILRKVEI 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01256 277 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 266 - -
Cca10g01256 277 PRINTS E-class P450 group I signature 223 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01256 277 PRINTS E-class P450 group I signature 94 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01256 277 PRINTS E-class P450 group I signature 74 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01256 277 PRINTS E-class P450 group I signature 213 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01256 277 Pfam Cytochrome P450 4 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01256 277 PRINTS P450 superfamily signature 214 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01256 277 PRINTS P450 superfamily signature 137 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01256 277 PRINTS P450 superfamily signature 85 102 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01256 277 PRINTS P450 superfamily signature 223 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01256 277 PANTHER CYTOCHROME P450 72A11-RELATED 4 266 - -
Cca10g01256 277 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 216 225 IPR017972 GO:0005506|GO:0016705
Cca10g01256 277 SUPERFAMILY Cytochrome P450 3 273 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca10g01256 277 Gene3D Cytochrome P450 1 276 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01256 Cca-Chr10 16650596 16747992 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01256 6 275 Cytochrome P450 AT3G14680 64.815 5.28e-126 366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01256 10 16650596 16747992 Cca10g01256 10 16650596 16747992 ECH