Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00039 ATGGATAAAGTAGTAGGGTGGAGTTTGAAGAGCTTCAGAACATTATTGGTTGTGGCTTCTGTAACCTTCCCTATTTTAGTCACATTTACTCTCATACGCCAAAACTCAACTTTTGATGTCGTCCAAGGATTTAACGCCTTGACTGGAAGAACCCAGAATACTACTACTAATGTCGTAAAACAAGGGACACAAAATGCTACTACTGCTGATGTCTTAAAACAAGGGTCTCCAAATGCTGGAGTTCAAGCTGGGAGACAAAAAGATCAGAATATTATTATTAGAGAGTCAGCTGTAGACAAGATTTTGGGAGACAAAAATAAAAATGCTACACCTGGGATCTTAGAAGAACGAAATCAGGCAATAACAATCTCAGACATTGGTCTAAAGAATCATTCATTTGAAGATGGGAAGAATGTTCCGTCCCCACCTACTACTACCATTGCTAATGACAAACTCCTTGACGGACTTCTAGTTTCCTCATTTGATGAAGCATCGTGCTTAAGTAGATACCAAACTTACTTATACCGTAAAGCTTCTCCTCATAAACCTTCTAAATATCTGATATCCAAGCTACGAGACTATGAACATCTTCATCGAAGTTGTGGACCTTATACCAAATTCTACAATAAAATCATGAGAAAGGGCGCAAAATTTAGCAAAAATGGTACCAGTACGAAGTGCAAGTATCTTGTCTGGACAGCTTCCAATGGCTTAGGGAATAGGATAGTAACCTTGGCTGCAGCATTTCTTTATGCTATCCTTACAGACCGTGTTCTACTAGTCAAATTCGGGGCAGATATGTTTGGTCTCTTTTGTGAGCCATTTCCTGATTCCTCATGGTTATTGCCCAGGAATTTTCCTTATTGGAAAGATCAGAAACATATTGAAACGTATGAAAGCATGTTACAGAATAGCAGGGAAAACAGTTCACAGGAGTTTTTGCCATCATTTCTTATTCTTAATCTACAGCACACCCATGACGGTCACAATAATTTTTTTCATTGCGATCCAAGTCAAGATCTTCTCCAGAAAATTCCTGTGCTGATTTTATTGTCGGATCAATATTTTGTCCCTTCTCTTTTTATGATTCCGTCATTTAGACAAGATCTAAGTAAAATGTTCCCGGAGAAAGACACAGTTTTTCATCATTTGGGACGTTACCTTTTACACCCATCAAATGAGCCATGGGAAATAATTAGAAAATTCTATGAGGCACACCTAGCCAAGGCAAATGAGAGGATTGGGCTGCAGATTAGAGTATTTAATACTCATCGAGCACCACATCAAACCATTATCAATGAAATTATGGCCTGCGCCCTTCAGCATAAGTTGCTGCCTGATTTTGACATACAAAAGTCAACAACTTCTCCTTTGAAGAAGACCTCAAAAGCTGTTCTGGTAGCATCTTTATTCTCAGAATATGGTGAGAAGCTGAAGAATATGTATCAGGAAAATACAACTGTGACGATGGAAGTAATAAGAGTTTATCAACCAAGTCATGAAGAGCGTCAAAAGTCAAATAATGACATGCACAACATTAAGGCATGGACTGAAATATATTTGCTGAGTTTGTGTGATGCATTGATTACAAGCCCCAAGTCTACTTTTGGGTATGTTGCTCATAGTCTTGGAGGTTTGAAGCCATGGATTTTGCAGAGGGCATACGGGGAAACCATCCCAAACCCACCTTGTCGACAAGCCAAGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAGTATGACTGTAGGGTCAACAGCACAGTTGATTTTACTTCACTTTTTCATCATATGAAGCATTGTGAAGATGTATCTAGTGGATTGAGGCTGGTTAATACTAATCACTAG 1845 0.3902 MDKVVGWSLKSFRTLLVVASVTFPILVTFTLIRQNSTFDVVQGFNALTGRTQNTTTNVVKQGTQNATTADVLKQGSPNAGVQAGRQKDQNIIIRESAVDKILGDKNKNATPGILEERNQAITISDIGLKNHSFEDGKNVPSPPTTTIANDKLLDGLLVSSFDEASCLSRYQTYLYRKASPHKPSKYLISKLRDYEHLHRSCGPYTKFYNKIMRKGAKFSKNGTSTKCKYLVWTASNGLGNRIVTLAAAFLYAILTDRVLLVKFGADMFGLFCEPFPDSSWLLPRNFPYWKDQKHIETYESMLQNSRENSSQEFLPSFLILNLQHTHDGHNNFFHCDPSQDLLQKIPVLILLSDQYFVPSLFMIPSFRQDLSKMFPEKDTVFHHLGRYLLHPSNEPWEIIRKFYEAHLAKANERIGLQIRVFNTHRAPHQTIINEIMACALQHKLLPDFDIQKSTTSPLKKTSKAVLVASLFSEYGEKLKNMYQENTTVTMEVIRVYQPSHEERQKSNNDMHNIKAWTEIYLLSLCDALITSPKSTFGYVAHSLGGLKPWILQRAYGETIPNPPCRQAKSMEPCFHYPPKYDCRVNSTVDFTSLFHHMKHCEDVSSGLRLVNTNH 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00039 614 Pfam Xyloglucan fucosyltransferase 145 583 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cca10g00039 614 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 9 613 - -
Cca10g00039 614 PANTHER FUCOSYLTRANSFERASE 2-RELATED 9 613 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cca10g00039 614 Gene3D - 397 550 - -
Cca10g00039 614 Gene3D - 224 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00039 Cca-Chr10 430559 432863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00039 142 610 Xyloglucan Fucosyltransferase1 AT2G03220 51.050 1.30e-165 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00039 K13681 - gmx:100799776 956.051