Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02720 ATGACAACCCAACGctttcactacctcctcctctccctcttcctcttcGCAGCCGCATTCTCCGCCGCCCAAGACCAGGCCCCGGCCCCCGCCTACGACGCCGACGCCGACGCCGACTTCATCCGCACCAGCTGCAACACCACGCTCTACCCAGACGTCTGCTACACCTCCCTCTCCCGCTACGCCAATGCGGTGCAGCAAAACCCCGCCCAGCTGGCGCGCGTCGCCATCGCCGTCAGCCTCGCCAAGGTCCACCGCGCCGCCTCCCACCTCTCCAACCTCACGCGCGACGCCGACTACGCCGCCACCGCGCGCGCCGCCCTCGCCCTCCGCGACTGCTTCTCCAACCTCGGCGACGCCGCCGACGAAATCCGCGGGTCTCTGAAGCAGATGCGGCAGATTGGAGCCGCCGGCAGCGGCGGCGCCTCGTTCCTCTTCCAGATGAGCAACGTGCAGACGTGGATGAGCGCAGCCCTGACCGACGAGGAGACGTGTACGGAGGGATTCCAGGACGTTGCGGACTGTCCCGTGAAAACGGATGTATGCGATCGCGTGAGCAGTGTTAAGAAGTTGACGAGCAATGCCTTGGCGCTCGTCAATTCCTACGCCAACAAAGGAATGCCTTGA 627 0.6236 MTTQRFHYLLLSLFLFAAAFSAAQDQAPAPAYDADADADFIRTSCNTTLYPDVCYTSLSRYANAVQQNPAQLARVAIAVSLAKVHRAASHLSNLTRDADYAATARAALALRDCFSNLGDAADEIRGSLKQMRQIGAAGSGGASFLFQMSNVQTWMSAALTDEETCTEGFQDVADCPVKTDVCDRVSSVKKLTSNALALVNSYANKGMP 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02720 208 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 7 205 - -
Cca09g02720 208 Pfam Plant invertase/pectin methylesterase inhibitor 39 198 IPR006501 GO:0004857
Cca09g02720 208 CDD PMEI-like_3 43 204 - -
Cca09g02720 208 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 202 IPR006501 GO:0004857
Cca09g02720 208 SMART PMEI_2 36 198 IPR006501 GO:0004857
Cca09g02720 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 205 - -
Cca09g02720 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 202 IPR035513 -
Cca09g02720 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 202 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02720 Cca-Chr9 52925419 52926461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02720 41 198 Carbohydrate Esterase AT5G53370 26.875 2.41e-11 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02720 09 52925419 52926461 Cca09g02720 09 52925419 52926461 ECH