Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02021 ATGTCCCGATCCCTCGTCTTCCCGCTCCTACTTTCTCTCTTCCTCTCTTCGGCCCTCGCTTCAGAGTCAGATCACAAGTATCAACGTGATGAAGCAGTTACCCTTTGGGTGAACAAAGTTGGCCCTTATAACAATCCACAAGAAACATACAACTATTACAGCCTCCCATTTTGTCATCCATCTAGTAGTGCTAGTGCCGCACACAAATGGGGTGGTCTTGGTGAGGTCCTGGGTGGCAATGAACTCATTGATAGCCAAATTGAGATAAAGTTCCAAAGAAATGTGGAGAAGACTGTCTTTTGCCAGATAGATCTCGATGATGCAAAAGTGAAACAGTTCAAGGATGCAATTGAGAATAATTACTGGCTTGAATTCTTCATGGGGTATGTTGGTGAGCTACATCCTGATAAGAACAGTGATAATGGCAAGCATGTTCTTTACACACACAAAAACATTATTGTTAAATACAACAATGATCAGATTATTCATGTCAATCTCACTCAGGATATCCCAAAGCCTTTGGAAGTTGGAAAACCTTTGGACATGACATATTCTGTCAAATGGATTTCCACCAATGTCACTTTTGGGCGTCGCTTTGATGTCTACCTCGACCATCCTTTCTTTGAGCATCAGATTCATTGGTTCTCCGTTTTTAACTCTTTCATGATGGTCATCTTCCTTACTGGATTGGTGTCAATGATATTGATGCGAACTCTGAGAAATGACTATGCAAAATATGCTCGGGAAGATGATGATTTGGAAAGTCTGGAGAGAGATGTAAGTGAAGAATCTGGCTGGAAACTTGTGCATGGTGATGTTTTCCGGCCTCCTCGCTACTTGGTTATTCTTTCAGCTGTTGTTGGCACAGGTGCTCAGCTAGCAATGCTGGTTCTTCTGGTCATCTTGTCAGCTATTGTTGGGATGTTGTATGTTGGGCGAGGAGCAATTGTCACTAACTTCATTGTGTGCTATGCTCTCACATCTTTCATTTCTGGTTATGTAAGTGGGGGAATGTACTCACGAAATGGGGGTAAAAACTGGATTAAATCCATGATCCTTACAGCTTCTCTGTTCCCATTCATGTGCTTTGGAATTGGATTTATCTTAAACACAATTGCTATATTCTATGGATCTCTAGCAGCAATTCCATTTGGCACAATTGTGACTATTCCTCGTCCCATTCCTGAAAAGAAGTGGTATCTCACTCCCTCTGTGGTTTCTCTGATGGGAGGACTGCTTCCCTTTGGCAGCATATTTATTGAAATGTATTTTGTATTCACTTCCTTCTGGAATTACAAGGTGTACTATGTATATGGCTTTATGCTGCTAGTCTTTCTGATTCTTATCATCGTTACTGTGTGTGTGACAATTGTGGGGACATACTTTTTGTTAAATGCTGAGAACTACCACTGGCAATGGACTTCTTTCTTTTCAGCTGCTTCAACAGCTGTTTATGTGTATTTGTACTCAATATACTACTACTATGTGAAGACGAAAATGTCAGGCTTCTTCCAAACCAGCTTCTATTTTGGATACACTTTGATGTTTTCTCTCGGACTAGGAATTCTATGTGGAGCTGTGGGTTTCCTTGGTTCAAATTTGTTCGTGAGAAGGATCTACAGAAACATCAAACTCTGGTCGTGGGGGAACCTAACAATGTTTACAGGTCTCATAATGGGACGGAGAGAAGGGACAGAAAATGAGGAAGGGACGAAGTGTAATGCATTTGAAAATATCTCGTTGCTGCTGTGA 1752 0.4132 MSRSLVFPLLLSLFLSSALASESDHKYQRDEAVTLWVNKVGPYNNPQETYNYYSLPFCHPSSSASAAHKWGGLGEVLGGNELIDSQIEIKFQRNVEKTVFCQIDLDDAKVKQFKDAIENNYWLEFFMGYVGELHPDKNSDNGKHVLYTHKNIIVKYNNDQIIHVNLTQDIPKPLEVGKPLDMTYSVKWISTNVTFGRRFDVYLDHPFFEHQIHWFSVFNSFMMVIFLTGLVSMILMRTLRNDYAKYAREDDDLESLERDVSEESGWKLVHGDVFRPPRYLVILSAVVGTGAQLAMLVLLVILSAIVGMLYVGRGAIVTNFIVCYALTSFISGYVSGGMYSRNGGKNWIKSMILTASLFPFMCFGIGFILNTIAIFYGSLAAIPFGTIVTIPRPIPEKKWYLTPSVVSLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILIIVTVCVTIVGTYFLLNAENYHWQWTSFFSAASTAVYVYLYSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGLGILCGAVGFLGSNLFVRRIYRNIKLWSWGNLTMFTGLIMGRREGTENEEGTKCNAFENISLLL 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02021 583 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 2 389 - -
Cca09g02021 583 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 387 544 - -
Cca09g02021 583 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 387 544 IPR004240 GO:0016021
Cca09g02021 583 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 2 389 IPR004240 GO:0016021
Cca09g02021 583 Pfam Endomembrane protein 70 49 390 IPR004240 GO:0016021
Cca09g02021 583 Pfam Endomembrane protein 70 389 503 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02021 Cca-Chr9 45290381 45299950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02021 16 544 Miscellaneous Gene Families AT1G10950 81.228 0.0 875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02021 09 45290381 45299950 Cca09g02021 09 45290381 45299950 ECH
Cca08g02786 08 62262149 62267662 Cca09g02021 09 45290381 45299950 PCT