Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01666 ATGACAGAAGCAAATTTTCCCTGCAGAATCATGGAGCAACAACAACCTCTTTCACTTTCTGTTTTCGCTGCTGcttcttctccttcttcttcttcttcttcttcAGAGGAACAGAACAATCCATCAGATGCAGTTATCTTCTTTGGTCTCAGTTTGGCTTTGGGGATTGCATGTAGGCACTTATTGCGTGGAACCAGAGTTCCTTATACTGTTGCCTTGCTCATCCTTGGCATTGCCCTTGGATCCATAGAATATGGTACTCATCATCGGCTGGGAAAGATTGGGCATGGAATTCGCCTTTGGTCAGAGATTGATCCAGATCTTCTATTAGCTGTTTTTCTCCCTGCTCTCCTTTTTGAGAGCTCATTCTTAATGGAAGTTCACCAAATTAAGAGGTGTATTGCACAAATGATCTTACTAGCTGGTCCGGGTGTTGCACTTTCCACCATTTGTCTCGGAGTTGTTTTGAAGCTTACTTTTCCATACAATTGGAGTTGGAAAACGTCACTGTTGCTTGGGGGACTTCTGAGTGCAACCGATCCTGTTGCTGTTGTGGCTTTGTTGAAAGATCTTGGTGCCAGCAAAAAACTAAGCACAATAATTGAAGGGGAATCCTTGATGAATGATGGGACTGCTATTGTGGTTTATACTCTTTTCTATCGGATGGTTCTTGGAGAGACCTTCAATTGGGTTGCTATAATCAAATTTCTAGCAAAAGTTTCACTTGGAGCTGTAGGAATGGGTCTTGCTTTTGGGATTGCATCTGTTTTGTGGCTTGGGTTTATTTTTAATGATACAGTGATTGAGATTGCTCTAACATTTGCTGTTAGCTACATTGCTTATTTCACTGCTCAGGAGGGTTCAGATGTCTCTGGTGTTTTGACAGTGATGTCTTTGGGGATGTTCTATTCAGCTTTTGCAAAGACTGCTTTTAAGGGTGAAAGTCAACAAAGCTTACATCACTTTTGGGAAATGATTGCTTATATTGCTAATACCTTAATTTTCATTTTGAGTGGAGTTGTTATAGCGGAAGGAGTACTTGGTGACGACAATGTTTTCTATCATGGAACATCGTGGACCCACCTCTTGCTTCTCTATGCATATGTTCAAGTGTCTCGATGCATTGTAGTTGGAGCATTATTTCCCTTTCTAAGATATTTTGGATATGGTTTGGATTGGAAAGAAGCTATTATTCTCATCTGGTCAGGATTGCGAGGAGCAGTTGCTTTGTCACTTTCATTATCAGTTAAGCGTTCGAGTGGCAAATCAGTTGAATTGACTTCAGAAACCGGAACACTGTTTGTTTTCTTCACTGGTGGAATTGTGTTTTTAACACTTATAGTAAATGGTTCAACCACACAATTCATTTTACACTACCTTGGCATGGATAAATTATCAGCAGCTAAGAGACGTATCCTCGACTTCACAAAGTATGAAATGTTGAACAAGGCATTGGAGGCTTTTGGGGAACTTGGAGATGATGAGGAACTTGGGCCTGTTGACTGGCCCACAGTGAAGAGATATATCTCCTGCTTAAATGACATTGAAGGTGAACGTGTTCACCCTCATGGTGCACTTGAAAGTGATAGTAACCTAGATCCTATGAACTTGAAAGACATAAGAGTACGCCATCTGAATGGTGTACAAGCTGCTTATTGGGAGATGCTTGATGAGGGAAGAATTTCTCAAACAACAGCTAATATCCTTATGCTTTCCGTAGAGGAAGCAATAGATTTGGCTTCATCTGAGCCTCTATGTGACTGGAGAGGTTTAAAAGCTAACGTTCATTTCCCGAATTACTACAAGTTTCTCCAGTCCAGTATATTCCCACCGAAGTTAATCACATACTTCACTGTGGAAAGGTTGGAATCTGCATGTTATATTTGTGCTGCATTTCTTCGAGCTCACAGAATTGCTCGACAACAATTACATGACTTCATAGGTGACAGTGATGTTGCTTCTGCTGTCATCAATGAAAGTGTTGTAGAAGGAGAAGAAGCACGTAAGTTCCTAGAAGATGTTAATTTAACATACCCACAGGTTTTGCGTGTTGTAAAAACAAGGCAAGCAACATATGCAGTGCTAAATCATTTAATTGAATATGTTCAAAACCTTGAGAAGGCTGGGATATTGGAAGAGAAAGAGATGCTACAACTCCATGATGCTGTCCAGACTGATTTAAAGAAATTACTTAGAAATCCTCCCTTGGTTAAGCTTCCTAAAATAAGTAATATACATCCTATGTTGGGTGCTCTCCCATCTTCAGTTAGTGAATCACTTTCAACCTCTACCAAGGAAACGATGAAATTGCGTGGTTTGACACTTTACAAGGAAGGTGCCAAGTCTAATGGTATTTGGTTAATTTCTAATGGAGTGGTGAAGTGGAAAAGCAAGATGGTTAGCACCAAGCACTCCTTTTATCCTACTTTTACGCATGGGAGCACATTGGGTCTTTATGAAGTGCTGACTGGAAGACCATATATCTGTGATGTCATCACAGATTCCGTGATATTCTGCATTTTTCTTGAAGCTGAAAAGATAAGATCATGTCTCAAATCAGATCCTTCAACGGAAAAATTCCTATGGGAGGAAAGTTCTATTTTCCTGTCCAAACTATTGCTTCCCCATATATTTGAGAAACTGGGTATGCAAGAGTTAAGAGCTCTTGTTGCAGATCCAAAGAGATCTCGAATGACCATATTCATTAGTGGGGAAACAATAGAAATCCCCCAGCATTCAGTTTCCCTCTTACTAGAAGGATATGTCAAAACTCAAGGTCGTCAAGAACTGGTAACAGCACCAGCAGCGCTGCTTCCTTCACACGGGAATCCAAGCTTCCAAAATTTGGCAAGTTCAGGTTCTAAGGAAGCTAGTTTTACTCATCAAGGATCTTGTTATCTAGTTGAAACTACATCAAGGGTAATTGTGTTTGACATTCCAGAATTTGAGGCTGATGATGCTCTTATTAGAAGATCAAGTTCACTGTTATCATCACATGCCCCGGATCATCCTCATAGATCTTTCCGCCGAAAACATAGTGGTCTTATGAGTTGGCCCGAACATTTCTACAAAAACCATCAGCAGGGATCTGAAGACATTGGGCGACAAACCAATAGTTTGTCTGCAAGGGCAATGCAGTTGAGCATTTATGGGAGCATGGTCGACATCCCTCACCGGAGTAGAAGTTTAAGCAATCATGGCAGACCACCTCATAGTTTCTCCTATCCAACCATTGTGTCGCATCAAGGCCGTCCACTTGTTTCAGTCAAATCAGAGGGAGCTGCAACTGCCAAGAAGGTCCATGAGGTCACAAGACATGTTCCAAATCCACCTTCACAAAGCACAGGACGAAGACAGCATCATCATGGAGATAATTCAAGTGATGATTCTGCAGCTGAAGAGGAAGATATTATTGTGAGGATTGATTCACCAAGCACGCTATCTTTTCGCTAG 3453 0.4072 MTEANFPCRIMEQQQPLSLSVFAAASSPSSSSSSSEEQNNPSDAVIFFGLSLALGIACRHLLRGTRVPYTVALLILGIALGSIEYGTHHRLGKIGHGIRLWSEIDPDLLLAVFLPALLFESSFLMEVHQIKRCIAQMILLAGPGVALSTICLGVVLKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKDLGASKKLSTIIEGESLMNDGTAIVVYTLFYRMVLGETFNWVAIIKFLAKVSLGAVGMGLAFGIASVLWLGFIFNDTVIEIALTFAVSYIAYFTAQEGSDVSGVLTVMSLGMFYSAFAKTAFKGESQQSLHHFWEMIAYIANTLIFILSGVVIAEGVLGDDNVFYHGTSWTHLLLLYAYVQVSRCIVVGALFPFLRYFGYGLDWKEAIILIWSGLRGAVALSLSLSVKRSSGKSVELTSETGTLFVFFTGGIVFLTLIVNGSTTQFILHYLGMDKLSAAKRRILDFTKYEMLNKALEAFGELGDDEELGPVDWPTVKRYISCLNDIEGERVHPHGALESDSNLDPMNLKDIRVRHLNGVQAAYWEMLDEGRISQTTANILMLSVEEAIDLASSEPLCDWRGLKANVHFPNYYKFLQSSIFPPKLITYFTVERLESACYICAAFLRAHRIARQQLHDFIGDSDVASAVINESVVEGEEARKFLEDVNLTYPQVLRVVKTRQATYAVLNHLIEYVQNLEKAGILEEKEMLQLHDAVQTDLKKLLRNPPLVKLPKISNIHPMLGALPSSVSESLSTSTKETMKLRGLTLYKEGAKSNGIWLISNGVVKWKSKMVSTKHSFYPTFTHGSTLGLYEVLTGRPYICDVITDSVIFCIFLEAEKIRSCLKSDPSTEKFLWEESSIFLSKLLLPHIFEKLGMQELRALVADPKRSRMTIFISGETIEIPQHSVSLLLEGYVKTQGRQELVTAPAALLPSHGNPSFQNLASSGSKEASFTHQGSCYLVETTSRVIVFDIPEFEADDALIRRSSSLLSSHAPDHPHRSFRRKHSGLMSWPEHFYKNHQQGSEDIGRQTNSLSARAMQLSIYGSMVDIPHRSRSLSNHGRPPHSFSYPTIVSHQGRPLVSVKSEGAATAKKVHEVTRHVPNPPSQSTGRRQHHHGDNSSDDSAAEEEDIIVRIDSPSTLSFR 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01666 1150 MobiDBLite consensus disorder prediction 1117 1140 - -
Cca09g01666 1150 Gene3D - 165 217 - -
Cca09g01666 1150 Gene3D Jelly Rolls 741 866 IPR014710 -
Cca09g01666 1150 SUPERFAMILY cAMP-binding domain-like 746 862 IPR018490 -
Cca09g01666 1150 PANTHER - 38 984 - -
Cca09g01666 1150 PANTHER SODIUM/HYDROGEN EXCHANGER 38 984 IPR018422 GO:0006812|GO:0015299|GO:0016021
Cca09g01666 1150 MobiDBLite consensus disorder prediction 1090 1150 - -
Cca09g01666 1150 ProSiteProfiles cAMP/cGMP binding motif profile. 748 851 IPR000595 -
Cca09g01666 1150 Pfam Sodium/hydrogen exchanger family 46 457 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01666 Cca-Chr9 40604723 40625020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01666 41 1150 Antiporters AT2G01980 65.031 0.0 1423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01666 09 40604723 40625020 Cca09g01666 09 40604723 40625020 ECH