Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01665 ATGGAAAGCCATGTCCAGCTCCCTTCGTCAAACGACGTCGTCGTCAACGTCAACGGCGACCCCGCTCCTACCAACGTTGCATGTTCCCCTCAACAACATCAGAAGGGGAAGGAAAGAAGGGACACTTTGCTTCTTGCATACAAGACTCTTGGAGTGGTTTTTGGAGGACTTGTAACATCACCACTCTACGTCTACCCTTCAATGCCACTCAAATCTCCTACGGAAGATGACTATCTCGGCATTTACAGCATCATGTTTTGGACTCTTACTCTCATAGGGGTCGTTAAGTATGCCAACGTTGCCATCAAAGCTGATGACCACGGTGAAGGTGGGACTTTTGCCTTGTACTCGTTGCTTTGCAGGCATGTCAATATAGGGATCCTGCCTTCCAAGCATGTCGGTTTGAACTCAACTAAGGACTTTCAAAAGAGTACTTTGCTTGCCAGGTTCTTCCAAACAAGCGTAGTTGCTCGGAGGCTCTTGCTCTTTGTTGCTATGTTGGGTACTTGCATGCTTATTGGTGATGGAATACTTACGCCCGCAATTTCAGTGCTGTCAGCTATGGATGGACTAAGAGCACCTTTTCCTTCAGTTAGCAAATCGCTAGTGGAAACACTCTCTGCAGTTGTCTTGATCGTTCTGTTCTTGTTGCAAAAGTTCGGTACATCCCGTGTTAGTTTCCTCTTTTCCCCAATAATGGGAGCATGGACCCTGAGTACCCCAATTGTAGGAATTTACAGCATCATACACCACTATCCTACCATATTTAAGGCTTTATCTCCGCACTATATATTCCGTTTCTTTTGGACAAATGGAAAATCTGGCTGGCTTTTACTTGGTGGTACTGTCCTTTGCATCACAGGTTCTGAGGCAATGTTTGCTGATCTTGGTCATTTCAATCAGAAGTCCATTCAGATAGCTTTCCTATTCACAATCTACCCATCTTTAGTTCTGACTTATGCGGGACAGACAGCATACCTGATCAAACATCCCAATGATCATGATGATGGCTTTTACAAATTTATACCAACTTCAGTCTACTGGCCTATCTTTGTCATTGCAACTTCGGCTGCTGTTGTTGCTAGCCAGTCGTTAATATCAGCCACATTTTCTGTAATCAAGCAATCTGTAGTGCTGGATTATTTTCCTCGTGTAAAGGTTGTCCACACATCTCATGATAAAGAAGGAGAGGTTTACTCCCCTGAAGTGAACTACATCCTGATGGTCCTTTGTGTTGCCGTGATACTTATTTTTGGAGATGGAAAAGATATTGGAAATGCTTTTGGTGTTGTTGTGAGCCTAGTAATGCTTATCACCACTATATTACTTACATTGGTCATGATCATGATATGGAGGACTCCGATGGTGCTGGTTACCCTATACTTTGTTGTATTTTTTGTGATGGAAGGGGTTTATGTGAGTGCAGTTTTCACTAAATTTGCTGAAGGTGGATGGATTCCTTTTGCCATATCATTTATCCTTGCTTTCATCATGTTTGGTTGGTTTTATGGTAGACAAAGAAAGATTGATTATGAGTTAAATCACAAGATAACCTTTGAGACACTTGAAGAGCTTTTAGCTGACCGCAGTGTTCAAAGGGTTCCTGGGCTATGCTTCTTTTACACCAACATTCAAGAAGGGCTAACTCCTATTCTTGGACACTACATAAAGAGCATGAAATCCCTTCATAAGATCACAATATTCACTACTCTTCGGTATTTGTTAATCCCCAAGGTAGCTCCACATGAAAGGATTGTCATCAAGAAATCAAATCTCAAAGGGGTATATTGCTGTGTGATTCAATATGGCTATGCAGATGCTCTAAATTTAGAAGGAGATCATTTTGTCGATCAAGTCATTAGTAGTTTGACACAACATATACAGAACTCTCAGTCTCCTGAGAATCTTTCGTCTGATTCTCAAGAGATTGAAGAGACTTCTAACTTAGAAGAAGCAAGGCGTGCCGGAGTTGTTCATGTTCGTGGAAAAACAAGATTTTACATTGGCTTGAACTGTGGCTGGTTTGATAAAATTGTGCTCAGGTTTTATGAAGTCATGCATAGTAACTGTAGATCTGGCCTTCCTGCTCTAGGGGTTCCACCACAGCAACGGATTGAAGTTGGAATGCTATACGAGGCTTGA 2142 0.4216 MESHVQLPSSNDVVVNVNGDPAPTNVACSPQQHQKGKERRDTLLLAYKTLGVVFGGLVTSPLYVYPSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYANVAIKADDHGEGGTFALYSLLCRHVNIGILPSKHVGLNSTKDFQKSTLLARFFQTSVVARRLLLFVAMLGTCMLIGDGILTPAISVLSAMDGLRAPFPSVSKSLVETLSAVVLIVLFLLQKFGTSRVSFLFSPIMGAWTLSTPIVGIYSIIHHYPTIFKALSPHYIFRFFWTNGKSGWLLLGGTVLCITGSEAMFADLGHFNQKSIQIAFLFTIYPSLVLTYAGQTAYLIKHPNDHDDGFYKFIPTSVYWPIFVIATSAAVVASQSLISATFSVIKQSVVLDYFPRVKVVHTSHDKEGEVYSPEVNYILMVLCVAVILIFGDGKDIGNAFGVVVSLVMLITTILLTLVMIMIWRTPMVLVTLYFVVFFVMEGVYVSAVFTKFAEGGWIPFAISFILAFIMFGWFYGRQRKIDYELNHKITFETLEELLADRSVQRVPGLCFFYTNIQEGLTPILGHYIKSMKSLHKITIFTTLRYLLIPKVAPHERIVIKKSNLKGVYCCVIQYGYADALNLEGDHFVDQVISSLTQHIQNSQSPENLSSDSQEIEETSNLEEARRAGVVHVRGKTRFYIGLNCGWFDKIVLRFYEVMHSNCRSGLPALGVPPQQRIEVGMLYEA 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01665 713 TIGRFAM kup: potassium uptake protein 45 712 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca09g01665 713 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 32 712 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca09g01665 713 Pfam K+ potassium transporter 47 606 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca09g01665 713 PANTHER POTASSIUM TRANSPORTER 17-RELATED 32 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01665 Cca-Chr9 40593260 40597969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01665 40 712 Inorganic Solute Cotransporters AT4G13420 38.556 1.65e-176 522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01665 09 40593260 40597969 Cca09g01665 09 40593260 40597969 ECH