Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01635 ATGGAAGGTTTTCACCCTTCTTTGACCTCTCCTTTTTCATACACATTCCCTATCAGTGGTGCTGGCAGTAGCAACATTACCACAGTCACAGGCACTTATAGCTGCACTTCTACTCCATGGATGAACAGCAGAATATGGAGCAAGCTCCCTCAAAGGCTTCTTGATCGTGTCATAGCCTTCCTTCCCCCACCAGCTTTCTTTCGTGCTCGTTGTGTTTGCAAGAGATGGTATGCTCTTCTTTTCTCCAACACCTTCCTTGAATTGTACCTCCAAGTCTCCCCTCGCCGCCACTGGTTCATGTTCTTCAAGCACCACAAGACCCGCAAGAGCTACATCTACAAGAACAACAACAATGGAAGTGGTTGTGGACACGGTGCAGCCTCATCATGCGAAGAAGGATACCTCTTTGATCCCAATGACTTGACATGGTACCGCATTTCCTTTGCTTTGGTCCCTTCTGGCTTCTCCCCAGCATCTTCTTCAGCTGGCTTACTCTGCTGGGTTTCTGATGAGGCTGGACCAAAAACCATGCTTCTATGCAACCCTTTACTTGGTTCTCTAACTCAGTTACCCCCCACGTTGAGACCTAGGCTCTTCCCTTCCATCGGCTTAACCATCAGCCCCACCTGCATAGATGTCACTGTTGCCGGTGATGACATGATATCTCCCTATGCAGTGAAGAATTTGACTTCTGAAAGCTTTCACATCGATGGAGGAGGGTTTTACTCCTTGTGGGGCACCACTTCCTCTCTGCCAAGGCTTTGCAGCCTTGAATCTGGTCGAATGGTGTACGCTGAAGGGAAATTGTACTGCATGAATTGTAGCCCTTTCAGCGTGTTGGCCTATGACATCACATCAAACACTTGGTTCAAAATACAAGCCCCGATGAGGAGGTTCCTTAGGTCACCGAACCTTGTGGAGTGCAAGGGGAAGCTGCTCCTTGTTGCGGCGGTTGAGAAGAGCAAGCTGAACGTGCCCAAGAGTTTGAGGGTGTGGAGTTTGCAGGCGTGTGGGACCATGTGGGTGGAGTCGGAGAGAATGCCGCAGCAGCTTTATATTCAGTTTGCTGAATTGGAAGATGGGAACGGATTTGAATGTGTAGGGCATGGGGAGTTTATTGTGATCGTGATTCGTGGAACGGACAAGGCTTTGTTGTTTGATATATGCAGGAAGAGGTGGCACTGGATTCCACCCTGTCCTTACACTGCACATGATGGCTATGAGTTGCATGGCTTTGCATATGAACCTAGACTCGCCACCCCAGTCACTGGCCTTCTTGATCAGTTGGCACTCCCCTTCCAGAGTTTCAATGCTTAA 1317 0.4913 MEGFHPSLTSPFSYTFPISGAGSSNITTVTGTYSCTSTPWMNSRIWSKLPQRLLDRVIAFLPPPAFFRARCVCKRWYALLFSNTFLELYLQVSPRRHWFMFFKHHKTRKSYIYKNNNNGSGCGHGAASSCEEGYLFDPNDLTWYRISFALVPSGFSPASSSAGLLCWVSDEAGPKTMLLCNPLLGSLTQLPPTLRPRLFPSIGLTISPTCIDVTVAGDDMISPYAVKNLTSESFHIDGGGFYSLWGTTSSLPRLCSLESGRMVYAEGKLYCMNCSPFSVLAYDITSNTWFKIQAPMRRFLRSPNLVECKGKLLLVAAVEKSKLNVPKSLRVWSLQACGTMWVESERMPQQLYIQFAELEDGNGFECVGHGEFIVIVIRGTDKALLFDICRKRWHWIPPCPYTAHDGYELHGFAYEPRLATPVTGLLDQLALPFQSFNA 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01635 438 Gene3D - 102 406 IPR015915 GO:0005515
Cca09g01635 438 SUPERFAMILY F-box domain 39 118 IPR036047 GO:0005515
Cca09g01635 438 SMART fbox_2 49 89 IPR001810 GO:0005515
Cca09g01635 438 SUPERFAMILY Galactose oxidase, central domain 70 402 IPR011043 -
Cca09g01635 438 ProSiteProfiles F-box domain profile. 43 92 IPR001810 GO:0005515
Cca09g01635 438 PANTHER F-BOX/KELCH-REPEAT PROTEIN 46 419 - -
Cca09g01635 438 Gene3D - 41 86 - -
Cca09g01635 438 PANTHER PROTEIN UNUSUAL FLORAL ORGANS 46 419 - -
Cca09g01635 438 Pfam F-box domain 46 80 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01635 Cca-Chr9 40218903 40220219 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01635 09 40218903 40220219 Cca09g01635 09 40218903 40220219 ECH