Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01632 ATGAGGCTCAAGTTCTCAGCAGCGTGTTTTGTGTTATTGTGGTTGGCGGTGGAAGAAGCCACATGCTTCAGTTTGAGTTTGAGTTTGAGCAGAGAGAAAAAGGCGTCGGAATTCAGGAACAAACTGGATGAAAAGTTAGCCCCCTTGGCATCACCGCCAGTTTCGTCAGAAACCAAGAAGAGTGGGAGGGTGTTGTACGTGAGTGAATATGGTGCGGACCCAACTGGGTCAGAAGAAAGCAGTGATGGGATTCTGAAAGCATTGGAGGATGCATTTGAATTGCAGAAAGAGAAGGGTGGTGATCAATTGGTGGAGGGTGTGAATGATCTTGGAGGGGTTGTCATTGATTTGGAAGGTGGCAACTACAAAATCAGCAAACCCATCACATTCCCTTCATCTGCTGGTGGCAATCTTCTGGTAAAAGGAGGGACGTTGAGAGCATCTGATACATTTCCTGGTGATCGACATCTAGTTGAATTATGGTCATCAAATTCGGGGAAACTCGAGACAAAAGAATCTCTCAATGATGATGACTTCAAAAACATAAAAGCTCAGAACAATGCAATTTACTATGAAGACATAACATTCCGTGACATCCTCTTCGATTCATCCTATAGAGGAGGAGGGATTTTCATAGTTGATTCCGCTAGAACCCGGATCAACAATTGCTTTTTCCTTCATTTCACCACAGAAGGAATTCTGGTCCAGCATGGACATGAGACCTTCATATCAAGTTGTTTCCTCGGGCAGCACTCGACGGTCGGCGGAGACAAGGGCGAGAAGGACTTCTCAGGGGTGGCCATTGATCTTGCTAGCAATGATAATGCAGTCACAGATGTTGCAATTTTCTCAGCAGCCATTGGTGTTGTGCTGAGGGGTCAAGCTAACATTCTAACTGGGGTGCATTGTTATAACAAGGCAACATATTTTGGTGGCATAGGAATCTTGGTGAAATTGGCAGGTAATTCACTAACTAGAATTGACAACTGTTATCTTGATTACACTGGCATAGTCATGGAAGATCCTGTTCAAGTTCATGTCACTAATGGGTTGTTTCTAGGGGATGCTAATGTTGTTTTGAAGTCTATTAAGGGTCAAATTTTGGGTTTGAATATAGTGGATAATATGTTTAGTGGTGACCCCAACAAGAAGGCTCCGATTGTAAAACTAGAGGGGCAATTTAGTAGCATTGATCAAGTGGTGATTGATCGCAACAATGTGAATGGCATGAGCTTGAGATCAACGGTTGGGAAGTTAACTGCGAGTGGAAATGGCACAAAGTGGGTGGCTGATTTTTCATCAGTCTTGGTGTTTCCTAATAGGATTAGTCATTTTCAATATTCATTTTATGCTCAAGATGAGCCTAAATTTGTAGCACTTTCAGTGACTAATGTTTCTGATAATGTCGTTGTTGTGGAGAGTGAGAAAGAAGCTAAAGGGTCTGTCTCCTTCATAGTTGAACAATGA 1467 0.4281 MRLKFSAACFVLLWLAVEEATCFSLSLSLSREKKASEFRNKLDEKLAPLASPPVSSETKKSGRVLYVSEYGADPTGSEESSDGILKALEDAFELQKEKGGDQLVEGVNDLGGVVIDLEGGNYKISKPITFPSSAGGNLLVKGGTLRASDTFPGDRHLVELWSSNSGKLETKESLNDDDFKNIKAQNNAIYYEDITFRDILFDSSYRGGGIFIVDSARTRINNCFFLHFTTEGILVQHGHETFISSCFLGQHSTVGGDKGEKDFSGVAIDLASNDNAVTDVAIFSAAIGVVLRGQANILTGVHCYNKATYFGGIGILVKLAGNSLTRIDNCYLDYTGIVMEDPVQVHVTNGLFLGDANVVLKSIKGQILGLNIVDNMFSGDPNKKAPIVKLEGQFSSIDQVVIDRNNVNGMSLRSTVGKLTASGNGTKWVADFSSVLVFPNRISHFQYSFYAQDEPKFVALSVTNVSDNVVVVESEKEAKGSVSFIVEQ 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01632 488 SUPERFAMILY Pectin lyase-like 56 449 IPR011050 -
Cca09g01632 488 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 3 488 - -
Cca09g01632 488 Gene3D - 67 485 IPR012334 -
Cca09g01632 488 PANTHER POLYGALACTURONASE QRT3 3 488 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01632 Cca-Chr9 40191473 40195975 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01632 09 40191473 40195975 Cca09g01632 09 40191473 40195975 ECH