Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01618 ATGGCGAGAATGTGGGTGGTTCGATCCTTGGCAGTTGGGCATGCGATAAAGAATAGGGTTCGCCCAATCTTCTTCAACGCTCACCACCGTCTTCCTTCGCTCCCATCCAAACCCTCTCTCTTCGCCACCGCCGTCGCCTCCTCTCAGCTCTCCTTCctcccctccttccaccactcccactccctctcctccgccgcagCTCCTTCCGACGTTGTCCTCATCAATTCCGAGGAAGAGTTCAACAACATCCTTACCAAAGTTCGAGATGACTCGCTGCACGCCATCTTCTATTTCACTGCGGTCTGGTGTGGGCCTTGCAGGTTTATTTCTCCTATAGTTGGGGAGCTTAGCAAGAAGTACCCTCATGTAACAACATATAAGATTGACATTGATCAGGAAGCAATTCAAGGCACATTGGGCAAGTTGCAGATTACATCTGTGCCAACACTTCATTTCTTTCAGAATGGGAAAAAGGCTGATGAGCTTATAGGTGCTGATATTGCACGATTAAACCATATCACAGAGAAACTATTCAAGAAGGACTGA 546 0.4359 MARMWVVRSLAVGHAIKNRVRPIFFNAHHRLPSLPSKPSLFATAVASSQLSFLPSFHHSHSLSSAAAPSDVVLINSEEEFNNILTKVRDDSLHAIFYFTAVWCGPCRFISPIVGELSKKYPHVTTYKIDIDQEAIQGTLGKLQITSVPTLHFFQNGKKADELIGADIARLNHITEKLFKKD 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01618 181 Gene3D Glutaredoxin 66 179 - -
Cca09g01618 181 PANTHER THIOREDOXIN O1, MITOCHONDRIAL 1 179 - -
Cca09g01618 181 SUPERFAMILY Thioredoxin-like 63 166 IPR036249 -
Cca09g01618 181 Pfam Thioredoxin 73 166 IPR013766 -
Cca09g01618 181 PANTHER THIOREDOXIN 1 179 - -
Cca09g01618 181 ProSiteProfiles Thioredoxin domain profile. 61 181 IPR013766 -
Cca09g01618 181 CDD TRX_family 78 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01618 Cca-Chr9 40036226 40041538 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01618 09 40036226 40041538 Cca09g01618 09 40036226 40041538 ECH