Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01613 ATGGGTTCAAGAGTAGATACTGATGATGATAGTGATAACAGAGGTAGTATGTGGGATTTGGATCAGAAGCTTGACCAGCCTATGGATGAAGAGGCAGGAAGGCTCAAAAATATGTACAGAGAAAAAAAGTTTTCTGCATTGTTGCTTCTGCGGCTTGCATTTCAGAGTCTTGGTGTGGTTTACGGAGACTTGGGCACTTCACCCTTGTATGTTTTCTACAACACATTTCCTAATGGAGTGAAAGATCAGGAGGATGTAATTGGAGCTCTTTCTTTGATTATCTATTCTCTTACCTTGGTGCCACTCCTCAAATATGTTTTTGTTGTATTAAGAGCAAATGACAATGGCCAAGGTGGGACATTTGCACTTTATTCCTTGCTTTGCCGACATGCAAAGATAAAAACCATTCCCAACCAGCATCGAACAGATGAAGAGTTAACGACATATAGTCGTTCTACCTTCCATGAAAGGTCATTTGCTGCAAAAACCAAAAGATGGTTAGAAGAACAAGAATCTGCAAAGAGTGTCATTCTTATTCTTGTCCTTGTTGGCACCTGCATGGTTATTGGAGATGGTATTCTTACCCCAGCTATATCTGTTTTGTCAGCTGTTGGTGGCATCAAGGTAAATCAGCCTCACATGAGTAGTGGTGTAGTAGTGCTGGTTGCTGTGGTAATATTAGTTGGGTTCTTCAGCTTGCAACATTATGGCACAGATAGAGTTAGTTGGCTCTTTGCTCCAATTGTCCTTCTTTGGTTTCTCCTAATTGGAGGAATAGGTATATTTAACATCTGGAAGTATGGAAGTAGTGTTCTAAAAGCTTTTTCTCCAGTTTATATATATCGCTATTTTAGAAGAGGAGGAAAAGAAGGCTGGACTTCCCTTGGTGGGATCATGCTCAGCATAACTGGGACAGAGGCTCTTTTTGCTGATCTAGCTCATTTTCCGGTCTCAGCTGTACAGCTTGCATTTACTCTAGTTGTGTTTCCTTGCCTTCTTTTGGCTTATACTGGTCAGGCTGCTTACCTTATGAATAACTTGAGCCATTCACAAGATGCTTTTTATCGGTCTATTCCAGatagaatatactggccagtatttattgttgcaacatttgcagccatagttgcaagccaggccacaataactgcaaccttttcaattattaagcaagcccttgctcttggatgtttccctagagtaaaagttgtatatacatcaaagaaattccttggccagatatatgttccagatattaattggatccttatgattctttgcatcggtgttactgctgggttcgaaaatcaaaaccagattggaaatgcatacgGTACTGCAGTTGTGATAGTCATGCTGGTTACAACATTCCTTATGATTTTAATCATGATACTAGTGTGGCGCTGCCACTGGATTCTTGTCCTCCTCTTCACTGGCTTATCATTGATTGTGGAATTCACATACTTCTCCTCAGTACTATTCAAAGTTGATCAAGGTGGTTGGGTTCCACTTGCAATTGCTGGAGCATTCCTTATTATCATGTCTGTCTGGCATTACGGCACAGTGAAGCGCTACGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTCGGGCTTGGACCGAGTTTAGGACTTGTTCGTGTCCCTGGAATTGGACTAGTGTACACTGAACTTGCAAGTGGAGTACCCCACATCTTCTCTCATTTCATCACCAACCTACCAGCCATCCATTCAGTAGTTGTTTTTGTATGTGTGAAATACCTTCCTGTCTACACAGTCCCAGAAGAAGAGCGATTCCTTGTCAAGAGGATTGGACCTAAGAATTACCACATCTTTCGATGTGTCGCACGGTATGGGTATAAAGATTTGCACAAGAAAGATGACGATTTTGAGAAAAAACTCTTTGATAACCTTTTCATGTTCGTTCGGCTTGAGTCTATGATGGAAGGATGTTCAGATTCAGATGAATACAGCTTATATGGACACCAAATAGAGGCTTCAAGAGATGGCCTTATGCATAACAATGGAAACACTGTTTCTTCCACTATGGATTTAACAATGTCCTCAGTAGACTCAATAGTACCAGCTAGATCACCAACCCACATGAATATTACAGTCAGGTCTTCTGGTCAAACAAGCAGCCAGACTGAAATTGATGAACTTGAATTTTTAAACAGCTGCAGGGATGCTGGGGTGGTTCACATACTAGGAAACACAGTTGTGAGGGCAAGGAGGGAATCAAGATTCTACAAGAAAATAGCTGTTGATTATATATATGCATTTCTTAGGAAAGTATGCAGGGAAAATAGTGTCATATTCAATGTTCCTCATGAGAGTCTCTTGAATGTTGGTCAGATTTTTTATGTATAG 2376 0.3657 MGSRVDTDDDSDNRGSMWDLDQKLDQPMDEEAGRLKNMYREKKFSALLLLRLAFQSLGVVYGDLGTSPLYVFYNTFPNGVKDQEDVIGALSLIIYSLTLVPLLKYVFVVLRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFHERSFAAKTKRWLEEQESAKSVILILVLVGTCMVIGDGILTPAISVLSAVGGIKVNQPHMSSGVVVLVAVVILVGFFSLQHYGTDRVSWLFAPIVLLWFLLIGGIGIFNIWKYGSSVLKAFSPVYIYRYFRRGGKEGWTSLGGIMLSITGTEALFADLAHFPVSAVQLAFTLVVFPCLLLAYTGQAAYLMNNLSHSQDAFYRSIPDRIYWPVFIVATFAAIVASQATITATFSIIKQALALGCFPRVKVVYTSKKFLGQIYVPDINWILMILCIGVTAGFENQNQIGNAYGTAVVIVMLVTTFLMILIMILVWRCHWILVLLFTGLSLIVEFTYFSSVLFKVDQGGWVPLAIAGAFLIIMSVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNYHIFRCVARYGYKDLHKKDDDFEKKLFDNLFMFVRLESMMEGCSDSDEYSLYGHQIEASRDGLMHNNGNTVSSTMDLTMSSVDSIVPARSPTHMNITVRSSGQTSSQTEIDELEFLNSCRDAGVVHILGNTVVRARRESRFYKKIAVDYIYAFLRKVCRENSVIFNVPHESLLNVGQIFYV 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01613 791 TIGRFAM kup: potassium uptake protein 52 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca09g01613 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca09g01613 791 PANTHER POTASSIUM TRANSPORTER 2 790 - -
Cca09g01613 791 MobiDBLite consensus disorder prediction 1 20 - -
Cca09g01613 791 Pfam K+ potassium transporter 53 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01613 Cca-Chr9 39958819 39969902 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01613 09 39958819 39969902 Cca09g01613 09 39958819 39969902 ECH