Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02786 ATGTCCATCTTCTCCAGATTCTCTCTCCTCTTCCTCTTCCTCCTCTCTCCGGCCTTCGCCTCCGAGTCGGATCACAGGTATCAACAAGACGAGCAGGTTATCCTTTGGGTAAACAAAGTTGGTCCTTATAACAATCCACAAGAAACATACAATTATTACAGCCTACCGTTTTGCCGTCCACCTGGTAATGCTGCACACAAATGGGGTGGTCTCGGTGAGGTCCTAGGTGGCAATGAACTCATTGATAGCCAACTTGATATAAAATTCCTAGCAAATGTGGAAAAGACCACCTATTGCCGTGTGGAACTTGATGAAGCAAAGGTTAAGCAGTTCAAGGATGCAATTGAGAATAATTACTGGCTTGAATTCTTCATGGATGACCTTCCATTGTGGGGGTATGTTGGCGAGCTACATCCTGATAAGAACAGTGATAATGGCAAGCATGTCCTTTACACACACAAGAACATTAATGTTAAATACAATAAAGATCAGATCATTCATGTTAATCTAACTCATGACAACCCAAAGCCTCTGGAAGTAGGAAGACCTTTGGACATGACATATTCTGTCAAATGGACCCCTACTAATGTCACTTTTGCACGCCGGTTTGATGTATACCTGGACTATCCGTTCTTTGAGCATCAGATTCATTGGTTCTCCATTTTTAATTCTTTTATGATGGTCATCTTCCTTACTGGATTGGTGTCAATGATCTTAATGCGAACTTTGAGAAATGACTATGCAAAGTATGCTCGGGAGGATGATGACTTGGAAACTCTGGAAAGAGATGTTAGTGAAGAATCTGGCTGGAAACTTGTGCATGGTGATGTTTTTCGGCCTCCTCGCAGTTTGGTTGTTCTTTCAGCTGTTGTTGGTACAGGTGCTCAACTTGCATTGCTGGTTCTTCTTGTCATCTTGTTGGCTATTGTTGGAATGTTGTATGTTGGACGTGGAGCCATTGTCACAACCTTCATTGTATGCTATGCTCTCACGTCTTTCATTTCTGGTTATGTGAGTGGAGGGATGTACTCACGCAATGGGGGTAAAAATTGGATTAAATCCATGATCCTTACAGCATCACTGTTTCCATTCATGTGCTTTGGAATTGGATTTATCTTAAACACAATTGCTATATTCTATGGATCTCTGGCTGCAATCCCCTTTGGTACTATAGTTGTTGTTTTTGTTATTTGGGCTTTTATCGCTTTCCCTCTAGCACTTCTTGGCACAGTTGTTGGAAGAAACTGGAGTGGTGCTCCAAATAATCCATGTCGTGTGAAGACCATCCCTCGTCCCATTCCTGAGAAGAAGTGGTACCTCACACCATCTGTAGTTTCTCTGATGGGAGGACTGCTTCCCTTTGGCAGCATATTCATTGAGATGTATTTTGTATTCACTTCCTTCTGGAATTACAAGGTGTACTATGTCTATGGCTTCATGCTACTGGTTTTTCTGATTCTTATCATCGTTACTGTTTGTGTAACAATTGTGGGGACCTACTTTTTGTTAAATGCTGAGAACTACCACTGGCAATGGACTTCTTTCTTTTCAGCTGCCTCAACAGCTGTTTATGTGTATTTGTACTCAGTATATTACTACTATGTGAAGACGAAGATGTCAGGTTTCTTCCAAACCAGCTTCTATTTTGGATACACTTTGATGTTCTGTCTTGGACTGGGAATTCTCTGCGGAGCTGTGGGTTATCTCGGTTCGAATTTGTTTGTGAGGAGGATCTACAGAAACATCAAGTGTGACTAA 1758 0.4175 MSIFSRFSLLFLFLLSPAFASESDHRYQQDEQVILWVNKVGPYNNPQETYNYYSLPFCRPPGNAAHKWGGLGEVLGGNELIDSQLDIKFLANVEKTTYCRVELDEAKVKQFKDAIENNYWLEFFMDDLPLWGYVGELHPDKNSDNGKHVLYTHKNINVKYNKDQIIHVNLTHDNPKPLEVGRPLDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAREDDDLETLERDVSEESGWKLVHGDVFRPPRSLVVLSAVVGTGAQLALLVLLVILLAIVGMLYVGRGAIVTTFIVCYALTSFISGYVSGGMYSRNGGKNWIKSMILTASLFPFMCFGIGFILNTIAIFYGSLAAIPFGTIVVVFVIWAFIAFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILIIVTVCVTIVGTYFLLNAENYHWQWTSFFSAASTAVYVYLYSVYYYYVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02786 585 Pfam Endomembrane protein 70 49 542 IPR004240 GO:0016021
Cca08g02786 585 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 7 585 IPR004240 GO:0016021
Cca08g02786 585 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 7 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02786 Cca-Chr8 62262149 62267662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02786 16 585 Miscellaneous Gene Families AT1G10950 90.000 0.0 1015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g02786 08 62262149 62267662 Cca09g02021 09 45290381 45299950 PCT