Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01245 ATGATGATGATGTTTGAAGACATGGGGTTTTGTGGGGATTTGGATATGTTTTCTGCTCCCTTAGGAGAAGGGGATATTACCGCCCGGCAAACTGAACCAGAGGCGATAGTTGAGGATGACTATAGTGATGAAGAAATTGATGTGGATGAGCTCGAGCGGAGGATGTGGAGGGACAAAATGCGTCTCAAGCGATTGAAGGAGCAAAGTAAAGGTAAGGAAGGAGTTGATGCTGTGAAGCAGAGGCAGTCCCAAGAACAGGCCAGGAGGAAAAAGATGTCAAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCTCAAGGCTTTGTCTATGGCATAATTCCTGAGAAGGGGAAGCCTGTGACTGGTGCATCTGACAATCTTCGCGAATGGTGGAAGGATAAAGTCCGGTTTGATCGCAACGGTCCCGCGGCCATAGCCAAGTACCAAGCTGACAATGCAATTCCAGGGAAGAATGATGGATGCAATTCCATTGGTCCTACCCCTCACACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTTTTGTCTGCCCTCATGCAGCACTGCGACCCCCCTCAGCGGCGGTTCCCGTTGGAGAAGGGCGTCCCTCCACCATGGTGGCCTACAGGGAATGAAGAGTGGTGGCCCCAAATTGGTTTACCTAAGGATCAAGGCCCTCCACCTTACAAGAAGCCTCATGACCTTAAGAAGGCTTGGAAAGTTGGTGTTCTGACTGCTGTTATCAAGCACATGTCTCCTGATATTGCCAAAATTCGCAAGCTTGTGAGGCAGTCCAAGTGCCTTCAGGATAAAATGACGGCCAAGGAGAGTGCCACCTGGCTTGCAATCATCAACCAAGAGGAGGCCTTGGCAAGAGAGCTTTACCCTGATTACTGCCCCCCTTTGGCCTCCTCTGGAGGCAGTGGATCTATAGTCATCAATGACTGCAACGAGTATGACGTTGAAGGCGGCGACGATGAACCGAACTTTGATGTGGAAGACCGGAAGCCTGAGAATCTCCACACATCCAATCTTGGGATGGAGAGAATGAGGGGAAGACTGCCTGTTCAGCAGCCTTGTTTCCCAATCAAGGGAGAGGCTGTTACTAATTTGGATTTCATTCGAAAGAGGAAGATCTCTGGCGAGTTTAACATGACAATGGATCAGAAAAGTTACACATGTGAACACCCTCACTGTCCTTATAGTGAACTTCGCAATGGTTTTGCTGACAGAAATTCTAGGGACAATCATCAAATGAGTTGTCCCTACAGAGGCACTTCTTCAGATTATGGGGTTCCAAATTTTCATGTTAATGAGGTCAAGCCAGTCATATTCCCTCAGTCCTTTGTTCAACCCAAATCTACTACTCAGGCTGTTAACTTGGTTCCACCACCTTCATTTGATCTAACCGGACTCGGAGTCCCAGAAGATGGCCAGAAAATGATCAATGATCTCATGACAATCTATGAAACAAACGTTCAAGGCAGCAACAACAACAAGTACTTGAGTTCCAGTAACCATGTAGCTGCAGAAAATCCAAACCTTCCTCAGCCAAATATTCAGCAGCAACAGGACAACTTCTTTCATGGTCAAGGAATCACTATGGAGGGGAACTTGTACCAAAATGCCAACATGTCCAACAATCATCACATGTTTGCTAGGGAGGATGGTCAATTTGACCGTTTCAAAGCTTTGAATGCACCCTTTGAGAGCAATCACAACAACAACAACTTCAATCTGATGTTTGGGTCCCCTTGTGATTTGGCATCCTTTGATTTTAAGGAGGATATGCAAGGAGGAGGGATGGATGCTCTTCAGAAACAGACAGATTTTTCTATATGGTACCAGTGA 1875 0.4693 MMMMFEDMGFCGDLDMFSAPLGEGDITARQTEPEAIVEDDYSDEEIDVDELERRMWRDKMRLKRLKEQSKGKEGVDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPLASSGGSGSIVINDCNEYDVEGGDDEPNFDVEDRKPENLHTSNLGMERMRGRLPVQQPCFPIKGEAVTNLDFIRKRKISGEFNMTMDQKSYTCEHPHCPYSELRNGFADRNSRDNHQMSCPYRGTSSDYGVPNFHVNEVKPVIFPQSFVQPKSTTQAVNLVPPPSFDLTGLGVPEDGQKMINDLMTIYETNVQGSNNNKYLSSSNHVAAENPNLPQPNIQQQQDNFFHGQGITMEGNLYQNANMSNNHHMFAREDGQFDRFKALNAPFESNHNNNNFNLMFGSPCDLASFDFKEDMQGGGMDALQKQTDFSIWYQ 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01245 624 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Cca08g01245 624 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 2 623 - -
Cca08g01245 624 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
Cca08g01245 624 MobiDBLite consensus disorder prediction 67 92 - -
Cca08g01245 624 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 623 IPR006957 GO:0005634
Cca08g01245 624 Pfam Ethylene insensitive 3 49 296 IPR006957 GO:0005634
Cca08g01245 624 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Cca08g01245 624 Coils Coil 34 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01245 Cca-Chr8 36824679 36827981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01245 3 623 EIL Transcription Factor Family AT3G20770 61.598 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Cca08g01245 EIN3 3.9e-131 No_clan