Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00226 ATGAATCAGTGTGGTTATCAGCAGAAGAAGGCCTTGACAAGCTGTGAGGAGATGAGGATGGAATCCGTGGTGTGCCCTAAACCTCGAAGATTGGGCCTCTTTGATAACCACATCAGACCCTTCAGGCCACCCTTCATCAACTACCAATCAGAATTTGAAGATTCAGGAGTTGGGGCTGAGCTTCTTGATATTATTCTTCCCAAGGGAGGGTGCTATGCTGAGAGATCTGGGGTCCAGGTGGCATCATCACCCCCATTTTTCTGTGGATCTCCACCTAGCAGGGCTTCAAACCCTGTGATCCAAGATGAGCAATTTGGTAATGGTAATGAGAGTTTTGGTCCATTTTCCTTGGCACCCCCTTCACCATCTTCCACAGCTAGAGGTTGTGTTAGGATGAAGTTTGGTCACACCCCAGCTGCAGTGAGGATTGAAGGTTTTGATTGCCTCAGCAGGGATAGGCGCAATTGCAGCATTTCTGCTGTTGCCTGA 489 0.4867 MNQCGYQQKKALTSCEEMRMESVVCPKPRRLGLFDNHIRPFRPPFINYQSEFEDSGVGAELLDIILPKGGCYAERSGVQVASSPPFFCGSPPSRASNPVIQDEQFGNGNESFGPFSLAPPSPSSTARGCVRMKFGHTPAAVRIEGFDCLSRDRRNCSISAVA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00226 162 PANTHER - 1 162 - -
Cca08g00226 162 PANTHER EXPRESSED PROTEIN 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00226 Cca-Chr8 3161515 3163500 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02507 07 53890227 53892495 Cca08g00226 08 3161515 3163500 ECH
Cca02g02660 02 47908132 47908866 Cca08g00226 08 3161515 3163500 ECH
Cca08g00226 08 3161515 3163500 Cca08g00226 08 3161515 3163500 ECH