Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02344 ACTCGAACAGAGGTGTTCCGTCATCTCCTGCATTTTAAAATCTCATATTGTGATAAAATAGAGACGTTGCTGACATCAGAGTTAGTGCCATCACTTACAAAGTTGGTGACAATTCAAGTAGAGAACTGTATATCATTGAAGGAGATATTTGCAGGCCATCCACGCATTATTCATCGAGATATCAAGTCATCAAACATCTTGCTTGATCTTAACTATGAAGCTCGAGTTTCGGACTTTGGGCTTGCAAAATTGGCATTAGATTCAAATACACATGTAACTACACGTGTAATGGGAACCTTTGGGTACATGGCACCAGAATATGCAACAAGTGGGAAACTGACTGAAAAGTCTGATGTATATTCCTTTGGGGTTGTGCTTTTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCATCTCAACCAATCGGTGATGAGAGCTTGGTTGAATGGGCCCGGCCTCTGTTGACGGAAGCACTTGACAATGAAGATTTTGAAATTTTGGTGGATCCAAGACTGGGAAAGAACTATGATAGAAATGAAATGTTTCGGATGATTGAAGCTGCTGCAGCCTGTGTACGGCACTCCTCGGTGAAGAGGCCACGTATGAGTCAGGTGGTGAGAGCTTTAGATTCCTTAGATGAGTTTACGGATCTCAACAATGGCATGAAACCAGGGCAGAGTTCGGCTTTCGATTCTGCACAGCAATCTGCACAAATCAGAATGTTTAGAAGGATGGCTTTTGGGAGCAAGATAGTTCATCTTTCTTCAATGAGTCTCAGAGTAGCTGGAGGAGTAGAGATCATGACTCAACAACTAAATTCTCACAAAATAAATCTGGGTCTTGGAACGTTTGAGTTTGATGACTCACTTGCCAATGCATTTATTTTGCTGTAA 894 0.4195 TRTEVFRHLLHFKISYCDKIETLLTSELVPSLTKLVTIQVENCISLKEIFAGHPRIIHRDIKSSNILLDLNYEARVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDESLVEWARPLLTEALDNEDFEILVDPRLGKNYDRNEMFRMIEAAAACVRHSSVKRPRMSQVVRALDSLDEFTDLNNGMKPGQSSAFDSAQQSAQIRMFRRMAFGSKIVHLSSMSLRVAGGVEIMTQQLNSHKINLGLGTFEFDDSLANAFILL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02344 297 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 53 252 - -
Cca07g02344 297 Pfam Protein kinase domain 45 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02344 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 56 68 IPR008271 GO:0004672|GO:0006468
Cca07g02344 297 SUPERFAMILY Protein kinase-like (PK-like) 53 213 IPR011009 -
Cca07g02344 297 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02344 297 Gene3D Transferase(Phosphotransferase) domain 1 32 230 - -
Cca07g02344 297 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 53 252 - -
Cca07g02344 297 SMART serkin_6 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02344 Cca-Chr7 52002515 52010702 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02344 53 250 Trihelix Transcription Factor Family AT5G38560 79.000 2.22e-112 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Cca07g02344 Pkinase 8.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02344 - - gmx:100790988 385.956