Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00483 ATGGGTTGTTCTTTGGTGTGGTTGGTAATTGCGATTCAAGCGTGGAATTGGGGAGTGAAGGCGCAAGTGCAAGTGGAAGGCTTCAGGAACATATTTATACTAGCGGGTCAGAGCAACATGGCGGGTCGAGGGGGCGTCGTCAACGACACGTGGGACGGCGTCGTTCCGCCCCAGTGCGGCCCCAGCCCCTCCGTGGCCAGGCTGGACGCGCACCTCGCGTGGGTGGAGGCGCGTGAGCCTCTCCACGCGGACATCGACTCCAAGAAGAGCAACGGTGTTGGGCCGGGTATGGCCTTCGCCAACTCCGTCTTGGACACTCACCCACAGTTGGGCCCAATCGGTTTGGTCCCTTGCGCCATCGGAGGCACCAATATAAGCGAGTGGGAACACGGAAAATACCTCTACAATCACATGATAAAGAGGGCCAAGGCATCGTTGCGTCACGGTGCCTCTATTCGTGCTCTTCTCTGGTTTCAAGGAGAGTCCGATACGGTCAATCTACACGATGCACAGTCCTACCAAACAAGACTCCAAAAGTTCTTCTCCCACGTTCGTCATGATCTACAGTCTCCGTTGCTTCCTATAATCCAGGTAGCTCTGGCATCTGGAATGGGCCCTTACATAGAGATAGTAAGACAGGCTCAGCTGAGCATTGACTTCCTAAATTTGAGAACAGTGGACGCTCATGGATCACCCCTTCAGCCCGATGGGCTACACCTTTCGACACCGGCCCAGGTGCATCTTGGGCAGCTGATGGCTAACGCATTCCTTCAGTTCGTACCATCCTCAAATCTAAATCACAACGTTAGCCCAATTCGTGATGAGGCCATCAGGCTTTATATTTCTACCTTTTATGTTTATATGCTCCCCTTGTTCATAACGTTTATCACAATTATGCACAAAACTTTCTTATAG 915 0.5235 MGCSLVWLVIAIQAWNWGVKAQVQVEGFRNIFILAGQSNMAGRGGVVNDTWDGVVPPQCGPSPSVARLDAHLAWVEAREPLHADIDSKKSNGVGPGMAFANSVLDTHPQLGPIGLVPCAIGGTNISEWEHGKYLYNHMIKRAKASLRHGASIRALLWFQGESDTVNLHDAQSYQTRLQKFFSHVRHDLQSPLLPIIQVALASGMGPYIEIVRQAQLSIDFLNLRTVDAHGSPLQPDGLHLSTPAQVHLGQLMANAFLQFVPSSNLNHNVSPIRDEAIRLYISTFYVYMLPLFITFITIMHKTFL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00483 304 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 6 259 - -
Cca07g00483 304 Gene3D SGNH hydrolase 29 260 IPR036514 -
Cca07g00483 304 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 30 258 IPR005181 -
Cca07g00483 304 PANTHER CARBOHYDRATE ESTERASE-RELATED 6 259 - -
Cca07g00483 304 SUPERFAMILY SGNH hydrolase 30 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00483 Cca-Chr7 6584852 6587489 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00483 07 6584852 6587489 Cca07g00483 07 6584852 6587489 ECH
Cca05g00130 05 3015062 3017323 Cca07g00483 07 6584852 6587489 PCT