Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00479 ATGGCCTCTCTTCTTCTTAGACAGGCTCTGCTGCTCCGCGTTTGCTTCCATAACTACCAACGCTTcgccgccggagccgtcgccgcgcgtcaccgcctatggtgcagcgccgccgccAACTCTCCCTCCGACAAGGCGGACGACAAAACTAGCTCCGCCAGCATCGGCAATGCACGGAAAGCTCTTTTCCCGCCAAGCCAGCCGCGGTGGGAGGACGAGCCCGATTATCGGAAATGGAAGGACACCGAGGAAGCGATTCTCAAGGACATTGAACCCACCGTTTTGCTCGCCAAGGATATTCTCCACTCACGAAGGTATATGGATGGAGCGCGATTGAGTGCGGAGGACGAGAAAGTTGTTGTTCAGAAGCTCCTTGCTTACCATCCACACTCTGAAGATAAGATTGGATGCGGACTTGAATCCATTATGGTTGACCGTCATCCCCAATATCGACAATCAAGGTGTCTTTTTGTTGTTAGAACTGATGGCGGCTGGATCGATTTCTCCTATCAGAAGTGCCTTCGGGAATACATTAGAGATAAGTACCCTACTTATGCGGAAAGGTTTATTCGACAACATTTTAAGCGTGGGAGGATGTATATATAA 606 0.4455 MASLLLRQALLLRVCFHNYQRFAAGAVAARHRLWCSAAANSPSDKADDKTSSASIGNARKALFPPSQPRWEDEPDYRKWKDTEEAILKDIEPTVLLAKDILHSRRYMDGARLSAEDEKVVVQKLLAYHPHSEDKIGCGLESIMVDRHPQYRQSRCLFVVRTDGGWIDFSYQKCLREYIRDKYPTYAERFIRQHFKRGRMYI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00479 201 PANTHER DCL PROTEIN (DUF3223) 1 197 - -
Cca07g00479 201 Gene3D - 88 181 - -
Cca07g00479 201 PANTHER - 1 197 IPR044673 -
Cca07g00479 201 MobiDBLite consensus disorder prediction 40 75 - -
Cca07g00479 201 MobiDBLite consensus disorder prediction 43 57 - -
Cca07g00479 201 Pfam Protein of unknown function (DUF3223) 98 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00479 Cca-Chr7 6468312 6474793 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00479 07 6468312 6474793 Cca07g00479 07 6468312 6474793 ECH
Cca05g00133 05 3160193 3166057 Cca07g00479 07 6468312 6474793 PCT