Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00474 ATGGAAGCAGGGGAAGATTGCTGCGTCAAGGTCGCGGTCCACGTGCGGCCACTCATCGCCGACGAGAAGCTTCAAGGATGCAAGGACTGCGTCACCGTCGTCCCCGGGAAGCCGCAGGTGCAAATTGGCGCCCACTCCTTTACATTTGATCATGTTTACGGAAGCTCTGGTTCTCCCTCAAGTGCCATGTTTGAAGAATGCGTTTCTCCCCTTATTGATGGTTTGTTTCAAGGATATAATGCTACTGTTCTCGCATATGGCCAGACAGGTTCCGGGAAAACGTACACCATGGGAACTGGCTTTAAAGATGGTTGCCAACAAACAGGAATTATACCCCAAGTCATGAATGTTTTGTTTAGCAAAATTGGGACCCTAAAGCACCAGATTGATTTTCAGTTGCATGTTTCCTTTATTGAGATTCTTAAAGAAGAAGTAAGAGACTTGCTGGATCCCTCCTCCATGGGCAAACCAGAAACTGCAAATGGACATGCAGGAAAAATGACCTCTCCTGGGAAGCCACCAATACAAATTCGTGAGACATCAAATGGGGTCATTACCCTTGCAGGATCTACTGAAGTCAGTGTAGCAACATTAAAAGAAATGGCAGCTTGCCTGGAACAAGGATCACTGAGCAGAGCAACAGGGAGCACAAATATGAACAACCAATCCAGTCGATCTCACGCCATCTTCACCATCACATTAGAGCAAATGCGAAAGCTCAATATTCCTAGTGACAACGGTTTAAATGATACCATGAATGAAGAGTATCTTTGTGCCAAGTTACACTTAGTAGATCTTGCTGGATCAGAACGGGCTAAAAGAACAGGGTCTGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGCCTTCTAGCACTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAAAAGCGGAAGGAAGGCGTTCATGTTCCTTATAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCCTTGGGAGGTAATAGCAGAACTGTCATGATAGCCTGTATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAACACTTTGAAGTACGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTTATCAATAGAGACCCCATGTCCAATGAGATGCTAAAAATGCGACAACAACTAGAGTTTTTGCAGGCAGAACTTTGTGCTCGTGCTGGCGGCTCTTCTGAGGAAGTTCAGGTCCTTAAGGAAAGGATCGCTTGGCTTGAAGCTGCTAATGAAGATCTTTGTCGTGAACTTCATGAATACCGTAGTAGATGCTCTATGGTAGAACAAAGTGAAAGGGAACCTTATGATGGCAACACGTACATTGTGAAGACTGATGCAGTTAAGAGGAGCCTACCTATGACGGAAGCTGAGTATCCAATGAGTGAAACAATGGGTGATTCTAGGGAAATTGAAGAAGCAGCAAAAGAGTGGGAGCACACACTCCTGCAAAATAGTATGGATAGAGAGTTACATGAATTGAACAAACGCTTGCAGCAGAAAGAGTCTGAGATGAAGCTATTTGGAATATCTGATGCTGAAGTACTCAAGCAGCACTTTGGAAGAAAGATAATGGAATTGGAGGATGAGAAGAGAACAGTTCAGCAAGAGAGAGATTGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATATCCATGCCCAAAAATTGAAAGCACTTGAAGCACAGATTCTGGATCTTAAGAAGAAGCAAGAGAGTCAAGTCCAGCTTCTGAAGCAAAAACAAAAAAGTGATGAAGCAGCAAAGCGACTGCAAGACGAAATACAGTGCATAAAGGCCCAAAAGGTTCAATTGCAGCAAAGGATAAAACAAGAAGCAGAACAATTTCGGCAGTGGAAGGCTTCAAGAGAGAAAGAGCTGTTGCAATTAAAGAAGGAGGGAAGAAGAAATGAGTATGAAAGGCACAAGCTGCAAGCTTTAAATCAGCGGCAGAAAATGGTTCTTCAGAGAAAAACTGAAGAAGCTGCAACAGCCACCAAGAGGCTAAAAGAGTTGCTAGAAGCACGTAAAACCTCCAGCCGGGAGACTTCAGTTACCATGAATGGAAGTGCAACAAACGGGCAGAGCAATGAGAAGTCTTTACAGCGGTGGCTTGATCATGAACTAGAAGTCATGGTAAAGGAGCATGAAGTCCGTTTTGAGTATGAGAAACAGAGCCAAGTGCGAGCTGCCCTTGCAGAGGAATTAGCCATCCTGAAGCAAGTAAATGAGTTTGCTGCTAAGGGTATCAGTCCTCCGAGAAAGAATGGATTTGCCAGGGCATCCTCCATGTCACCAAATGCAAGAATGGCCAGAATAGCTTCACTTGAGAACATGCTGAGCATATCATCTAATTCACTTGTAGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAACGAGCCTTCTCAAATCGTGGACGCTGGAATCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAGTATATGTTTAATTCTGTAGCAGATGCTAGGTGCCAACTCTGGGAGAAGGACATGGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTTGGTCTCTTACGGCAAAGTGAGATGAAGAGGAAGGAAGCTGAGAAGGAGCTAAAAGTGAGAGAGCAAGCTGTTGGACCCACATTGGCTACACCACCTTCTGGAGACTCCCCAAATCCATTAAAACAAAATGCTGAAGACATGAAGGGGCCCATATCTCCAGTGTCTATGCCAGTACCAAAACAGCTAAAATACACGCCAGGGATTGCTAATAGCTTGGTGAGAGAATCAGCAGCATTTGTAGATCAGGGTAGAAGGATGGTACCCATCGGACAGCTGTCAATGAAAAAACTAGCAATTGTAGGACAAGCTTCTGGCAAGTTATGGAGGTGGAAAAGAAGTCATCATCAGTGGCTACTACAATTCAAGTGGAAGTGGCAGAAACCATGGAGACTTTCAGAATGGATTCGACACAGTGATGAGACAATGATCAGATCAAAACCACGTTCACCGGCTATGCCACGTATCAGGTGA 3087 0.4409 MEAGEDCCVKVAVHVRPLIADEKLQGCKDCVTVVPGKPQVQIGAHSFTFDHVYGSSGSPSSAMFEECVSPLIDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQQTGIIPQVMNVLFSKIGTLKHQIDFQLHVSFIEILKEEVRDLLDPSSMGKPETANGHAGKMTSPGKPPIQIRETSNGVITLAGSTEVSVATLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNIPSDNGLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEFLQAELCARAGGSSEEVQVLKERIAWLEAANEDLCRELHEYRSRCSMVEQSEREPYDGNTYIVKTDAVKRSLPMTEAEYPMSETMGDSREIEEAAKEWEHTLLQNSMDRELHELNKRLQQKESEMKLFGISDAEVLKQHFGRKIMELEDEKRTVQQERDCLLAEVENLAANSDGQTQKLEDIHAQKLKALEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQCIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLQALNQRQKMVLQRKTEEAATATKRLKELLEARKTSSRETSVTMNGSATNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAILKQVNEFAAKGISPPRKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFSNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWEKDMEIREMKDQIKELVGLLRQSEMKRKEAEKELKVREQAVGPTLATPPSGDSPNPLKQNAEDMKGPISPVSMPVPKQLKYTPGIANSLVRESAAFVDQGRRMVPIGQLSMKKLAIVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETMIRSKPRSPAMPRIR 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00474 1028 Pfam Kinesin motor domain 17 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g00474 1028 SMART kinesin_4 6 372 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g00474 1028 MobiDBLite consensus disorder prediction 691 717 - -
Cca07g00474 1028 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1027 - -
Cca07g00474 1028 Coils Coil 861 895 - -
Cca07g00474 1028 MobiDBLite consensus disorder prediction 696 717 - -
Cca07g00474 1028 Coils Coil 672 692 - -
Cca07g00474 1028 MobiDBLite consensus disorder prediction 151 177 - -
Cca07g00474 1028 ProSiteProfiles Kinesin motor domain profile. 8 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g00474 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 394 IPR027417 -
Cca07g00474 1028 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1027 - -
Cca07g00474 1028 Coils Coil 524 558 - -
Cca07g00474 1028 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g00474 1028 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g00474 1028 PRINTS Kinesin heavy chain signature 260 278 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g00474 1028 PRINTS Kinesin heavy chain signature 314 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g00474 1028 Gene3D Kinesin motor domain 2 391 IPR036961 -
Cca07g00474 1028 MobiDBLite consensus disorder prediction 885 925 - -
Cca07g00474 1028 Coils Coil 404 424 - -
Cca07g00474 1028 ProSitePatterns Kinesin motor domain signature. 259 270 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca07g00474 1028 CDD KISc_KIF4 7 365 - -
Cca07g00474 1028 Coils Coil 567 639 - -
Cca07g00474 1028 Coils Coil 491 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00474 Cca-Chr7 6423764 6435736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00474 9 390 Miscellaneous Gene Families AT5G06670 36.387 8.72e-52 193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00474 07 6423764 6435736 Cca07g00474 07 6423764 6435736 ECH
Cca05g00147 05 3353725 3366285 Cca07g00474 07 6423764 6435736 PCT