Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00473 ATGAGCCGGTGGATACGCGTGGCGGTGGCGGCCTCCGCCGTGGGATGCGTGGCAACCCTTCTCTTGGTCTTCCTCTGGCGTTGGTGTCACAGAAGAAGGCACAGGAATTTCGTGGAACCGACCAGAGTGGAGAACGTTCAGGGAGGGATTGAAGAGGGTTTTGAGTTGGATCAGGGAAACAAGAACAGCAAGGGAAGCTACAACAATTATTATGTTTTTCGTGGCAGCGTGTCTGGGAAAAGAGGCTTGTTCAACTGGGGTGATCATCCATCTATGGCCGCTGATGCCGTTGAAAACGGGTGGTCACGATTTGCTTTCACGGGCTACAAGAGTTACACGCCGTCTCCTTCGAAAAGATCAACGCTTTTAGGAGTTTGCGCTGCGCCGGGAAACGATTCGGGGAGAGAGAGAGAGAGGGAATCGGGGGCTGAGATAAGCTGGGAAGTGTCACGTGGATCTGCTGAGTTTATGCAGAAGGTCAGGTTGAACCCTGGGATCAAAAACTCTCAACAAAACCACAACTTATCTATGAATGTTGCTTCTATTATCAGAGGGGCTTTGCCTCTGCCTGGGCCTCCTTTGGGGCACTGTGCTTTTCCGCAAGAGGCGTATTTTGAGATTACTATTTTGTATTCTCGTGGGGATGAGGGTGAATCGGTTTCTGGGAAGAGTAAGGAGGGTGAAAAGACCAAGCTTTTGGTTCAGGGTAAGTCTAATGGTAAAGGGAATTCGGAGGCTTTGGTTCATGTTACTAGTGGGAATGGTAATAAAGTCAACAATGTTGAAGGAGAGGGTGGGAATGGGAATGGGAAAGGTCAATCTGTGATGTTCTCGTTGGGGTTAACAGCATTGGGTTCTGTTCCTTTGAGATTTCCTGGTAGCTACCCTGGCAGCATCGGCTTCAACTCCAACGGTTCTCTCTATCTTGATGGAATGAAACTTGTACGTGAATCGGAGAAGGCTGAATGGGTAGGAACCGATAGAGTGATTGGTTGTGGGTTTGATCCTAGACAGAAGAAGGTTTTCTTCACATTAGACTCAGAGCTAATGCATGTAATTCACTGCCAGACAGAGGAATTTGGCACACCACTGTTTCCAATCTTGGCTGCAAACATAGACATTATGGTGTTAGTTAATTTTGGACAAAGTGCATTTAAATATGCACCTGCAAATGCCCAGAGAACACCAAATCCATGCTTCATAGCCCCACTTGTAAATTCACCTGCTACATTGGGCTATGATGACAGCAGGGAACTATTCTCAATGGGAAGGATCGACTCTCAGTGGCTCAACCGGTCCACAACCAAAGGAAGCCACAACAATGGAaataataataataataataataataataatatcaataataatCGAACATTGGATTTTGATGAGGAGTCTGAGGCTGATCTATTTGAAATCGTCTTGGATGGTTCTGGAAAATCCCCACACACAGCATCATAG 1458 0.4623 MSRWIRVAVAASAVGCVATLLLVFLWRWCHRRRHRNFVEPTRVENVQGGIEEGFELDQGNKNSKGSYNNYYVFRGSVSGKRGLFNWGDHPSMAADAVENGWSRFAFTGYKSYTPSPSKRSTLLGVCAAPGNDSGRERERESGAEISWEVSRGSAEFMQKVRLNPGIKNSQQNHNLSMNVASIIRGALPLPGPPLGHCAFPQEAYFEITILYSRGDEGESVSGKSKEGEKTKLLVQGKSNGKGNSEALVHVTSGNGNKVNNVEGEGGNGNGKGQSVMFSLGLTALGSVPLRFPGSYPGSIGFNSNGSLYLDGMKLVRESEKAEWVGTDRVIGCGFDPRQKKVFFTLDSELMHVIHCQTEEFGTPLFPILAANIDIMVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPATLGYDDSRELFSMGRIDSQWLNRSTTKGSHNNGNNNNNNNNNNINNNRTLDFDEESEADLFEIVLDGSGKSPHTAS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00473 485 PANTHER RAN BINDING PROTEIN 9-RELATED 2 481 - -
Cca07g00473 485 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 2 481 - -
Cca07g00473 485 SUPERFAMILY Concanavalin A-like lectins/glucanases 290 387 IPR013320 -
Cca07g00473 485 MobiDBLite consensus disorder prediction 432 458 - -
Cca07g00473 485 MobiDBLite consensus disorder prediction 216 246 - -
Cca07g00473 485 MobiDBLite consensus disorder prediction 218 232 - -
Cca07g00473 485 Gene3D - 155 395 IPR043136 -
Cca07g00473 485 Pfam SPRY domain 291 382 IPR003877 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00473 Cca-Chr7 6396261 6398995 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00473 07 6396261 6398995 Cca07g00473 07 6396261 6398995 ECH
Cca05g00149 05 3411592 3413937 Cca07g00473 07 6396261 6398995 PCT