Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00451 ATGAACAATCCTCAGAGCCGCGCAAATTGGAGGAATCGCCCTTCGAAATCCTGCGTACCAGCAAGACTTCCGTTGAGAACATCGTCGCCGATATTCTCTCCATTAAAAAGGAGGCTAAACCCAAACAACACCTTCGAGATCTCGTCACTCAAATGTTCCTGCACTTCGTCACTCTCCGCCAGGTACTCTATTTCGCAACTCTTATTCTCTAGTCTAGGGTTTATGACTCTCTTCCTTTGTTTTCAGGCAAATCGCAATATCTTGCTTGAGGAAGACAGAGTGAAAACCGAAACGGAGCGTGCCAAGGCTCCCGTGGATTTCACATCGCTGCAGCTTCACAACCTTATGTACGAGAAAAGCCACTACGTGAAGGCAATCAAGGCTTGCAAAGACTTCAAGTCCAAATATCCCGACATTGACCTCGTTCCCGAGGAGGAGTTTTTCCGCGACGCTCCACAGGATATCAAGGACTCCGTTTTGTCAAGCGACGCTGCGCACAATCTCATGCTCAGGAGGCTCAATTTCGAGTTATTCCAGCGCAAAGAACTCTGCAAACTTCACGAGAAACTGGAACAACAAAAGAAAATTCTTTTGGAGACTATTTCAAACCGAAAGAAGTTCCTGACAAGTCTCCCTTCACATCTCAAGTCTCTTAAGAAGGCTTCCTTGCCAGTACAAAACCAGCTAGGGCTTCATCATACAAAGAGATTAAAGCAGCACCATTCGGCAGAGTTGCTTCCTCCAGCCCTTTATGTGATCTACTCACAACTGTTGGCTCAAAAGGAGGCCTTTAGAGAACCCATTGATCTGGAGATTGTAGGAAGCCTGAAAGATGCTCAAGCTTTTGCTCGTCAACAAGCTCACAAGGACACCGACATGTCCTCTACCGCTGATAGTTCCAAATTGGAAGATGATGCTCCTGATGAAGAAGAAGATGGTCAGAGACGGAGGAAAAGGCCAAGGAGGGTTCAAGTCAAGGATAGCCTTGATCAGGGTGGAATATTTCAAGCTCATCCACTTAAAATCATTATCCATCTGTATGAAGATGAGACTTCTGGTCCTAACTCTGCAAAACTCATTACTCTAAGGTTTGAGTACATGGTGAAGTTGAATGTTGTATGCGTTGGAATAGAAGGATCTAATGATGGTCCAGAGAATGACATCTTGTGCAATTTGTTCCCTAATGATACGGGTCTTGAGCTTCCTCACCAGTCAGCCAAACTCATTGTTCAGGATGCTAAAACATTCGATACACAAAGAACTTCACGTCCTTACAAATGGGCTCAGCACCTTGCAGGGATTGATTTCTTGCCTGAGGTGTCTCCCTTGATTCTTACAGACAATGATGGAGCGGTCAAGAATGAAAATGTTATATCTGGTCTTTCACTATATCGTCAGCAGAACCGAGTACTGACAGTTCTGCAGAGAATCCGTGCAAGAAGAAAAGCTCAGTTGGCTCTTCTGGAACAGCTAGAATCTCTGACAAAGCTTGAGTGGCCTCATCTGTCCTGCAAAAGTGTTCCGTGGGCTTTGCACACTCCTCTGTGTAATTTGGATAGTTGGTCACCTGTAAGAGTTCCACCTGTCCCTAGAGAATCCTCATCTCCTGCTGTCGTAGATAAAGAGGAGCATGTTCAGGAACCAATGGATGCTGATATAAATGAACGATCTGGTGCCACAAAAGCAGAACTGGAGAGTATAACAGAAGATGGGGAGCTTCCAACGTTGCTTCCTAACATGTCTAAGCTTGACCATTCCACACAACTGAACTTAATTTCAAAAAGTATCATTCCTCCACTCAATAAAATCAGGTCACAGAGTTTCAAAAAACTTGATGATAGTTCTGATTTCTTGTTGGATATTGAAAGTGATCTTGATGAGCCAGCACAGATTGAACAAGAACATGAAAATATATTATCCAGAAAGTCCGTGTCATGGATGGATTATGGGCTCAGGGAATTTCGCCTAGTTCTTTGCAGAAAAATCACTGCTGATGAGAGCAATGTGAATTTAGAAGCCAAGATCAAGATCAGCATGGAATATCCTTTAAGGCCTCCTCTTTTTGCATTGAGTATTTGCTGTATATCCTCTGGGGAAAACCATGATGGGACAGGATTAGAATGGTACAATGAACTTCGTGCAATGGAAGCAGAGGTCAATCTGCACATAATAAGGATGCTACCTGTCGATCAACAAAATTATATATTGGCTCATCAAGTGAGTTGTCTCGCTATGTTGTTCGACTATTATTTGGATGAGGCGTCTCCATCATCTGAAAGGACAAATTGTACTTCCGTGGTTGATGTTGGCTTATGCAAGCCTGTTAATGGTAGATTCCTGGGTAGATCTTTTAGAGGACGGGACCGCAGAAAGATGATATCCTGGAAAGACATGAACTTCAATTCTAGCCGTCCCTAA 2418 0.4376 MNNPQSRANWRNRPSKSCVPARLPLRTSSPIFSPLKRRLNPNNTFEISSLKCSCTSSLSARYSISQLLFSSLGFMTLFLCFQANRNILLEEDRVKTETERAKAPVDFTSLQLHNLMYEKSHYVKAIKACKDFKSKYPDIDLVPEEEFFRDAPQDIKDSVLSSDAAHNLMLRRLNFELFQRKELCKLHEKLEQQKKILLETISNRKKFLTSLPSHLKSLKKASLPVQNQLGLHHTKRLKQHHSAELLPPALYVIYSQLLAQKEAFREPIDLEIVGSLKDAQAFARQQAHKDTDMSSTADSSKLEDDAPDEEEDGQRRRKRPRRVQVKDSLDQGGIFQAHPLKIIIHLYEDETSGPNSAKLITLRFEYMVKLNVVCVGIEGSNDGPENDILCNLFPNDTGLELPHQSAKLIVQDAKTFDTQRTSRPYKWAQHLAGIDFLPEVSPLILTDNDGAVKNENVISGLSLYRQQNRVLTVLQRIRARRKAQLALLEQLESLTKLEWPHLSCKSVPWALHTPLCNLDSWSPVRVPPVPRESSSPAVVDKEEHVQEPMDADINERSGATKAELESITEDGELPTLLPNMSKLDHSTQLNLISKSIIPPLNKIRSQSFKKLDDSSDFLLDIESDLDEPAQIEQEHENILSRKSVSWMDYGLREFRLVLCRKITADESNVNLEAKIKISMEYPLRPPLFALSICCISSGENHDGTGLEWYNELRAMEAEVNLHIIRMLPVDQQNYILAHQVSCLAMLFDYYLDEASPSSERTNCTSVVDVGLCKPVNGRFLGRSFRGRDRRKMISWKDMNFNSSRP 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00451 805 MobiDBLite consensus disorder prediction 284 328 - -
Cca07g00451 805 PANTHER FMS INTERACTING PROTEIN 46 798 IPR019163 -
Cca07g00451 805 Coils Coil 180 200 - -
Cca07g00451 805 Coils Coil 474 494 - -
Cca07g00451 805 MobiDBLite consensus disorder prediction 310 326 - -
Cca07g00451 805 Pfam Fms-interacting protein/Thoc5 82 436 IPR019163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00451 Cca-Chr7 5963788 5969584 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00451 07 5963788 5969584 Cca07g00451 07 5963788 5969584 ECH
Cca05g00167 05 3829548 3835919 Cca07g00451 07 5963788 5969584 PCT