Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00437 ATGCAAGCGGTGGGTAGAATAATTAGTCAGGGCGTATACACGGTTTCAGGTCCCTTTCATCCCTTCGGTGGCGCCGTCGATATTGTGGTGGTGGAACAGCAAGATGGGAGTTTCAAGTCTTCTCCTTGGTATGTCCGATTTGGTAAATTCCAGGGGGTTTTGAAGGCAAGGGAAAAGGTGGTTGATATATGTGTCAATGGGGTGAACGCTGGTTTCCAAATGCACCTGGATCATAAGGGGGAAGCTTACTTTCTCAGGGAAATCGATTCACAAGAAGAAGCTAATTTATTGTTTCCATCTTCTTCTGGCGATGACGCAGATGATCTCTCTCACCCTCGCAATCTCAGGTCCAAAAGTTGCAACTATGATGGTGATGAGGTTGTGGGCCGGGCTGGTTCTCGTCGCTCTCGGATACTTGGCCTTGTGTTTGGGCGAAGGTCTTTGAAGAGGGATGATGGAGACGGTGATGGAATTGGGAACAGGGTTGGTTCTTTGGAGCGTGCTGAGATTGCAGCTAACTTGTTAGACATCAAGTGGTCCACCAATCTCTCCGCGGAAGACGGTCAAAACGTTCTTGCTAACTCGCCTGGGGATGCTAATGCAGTCATGGACAATGGTGGGTTGAAGGAGGAATCTTGTACTGATGGCGCGTGTAGCTTGAATGGGAAGGAAGTTGTGTATGATATTGCAGGGTCTGACGTGCAAGTTGCATGTGTGGAGGTGAAGCTTGTAGAGAAGGAATTGAATGGAGAAGAGGTTTCCGGTGATAATGGTAATGATGTTTCTACAGAGGACGTTTCAGCTGATGGGGTTTGCCGTGAAACATCAGAGACTAACTTGGACGTGGATTGTTCTAGTGAACAAGCTCCTGAGGTGATGTACCTTGCTGGCGCAGGATGTGAAGAAGTCCATGTCCGTGTCCAAGATGAAGTTTTGCATGGTGCAACTATACTGTTATCTGAGGGTGCAGAAGCTGAGGAAGTTCTTGAGAATGCTGGTGTTGGGATGCCAATATTGGAGGTCTCTGAGTTACATTCTCGAGTTCAGAAAACAGATTGTTCAGATTCTGATGATAGTGCAAACAATGAGGTGGATGTTGAAGAGCAACCGACATCTCCAAAACCTCAAACTGTCAAAAAGGGCCTAGGACATTCTTTGAGTGAGAAATTTACACCAAATTGTGTTATCAAACCTTCATCTTACAGCAGCCTGGATGACCATGTCTTAGATGCTAATAATACAAAGGATAATAATGATTCTAGCATGTTATCGTTTCCTCTGGACTCTGTTGATGATTGTTTACTTAGAAAAATGTCAAGGAGATCACCATCACCAACTTCAGAGGATGAAAATTTCCTTTTTAGTGACCTTGATGAAACCGTCATCAATGATCGATTCAGGAGATCATTCTCCCCTGAACATGCAGATAAAGAAGATCATGTTTCTTATGAGAATGACACCAAAAAGTTAGCAGTAATATCCAGTCCCATGGCTATTCCTAGAAATGAAGCTGCTGGGGAGGAAGTTGGGCAGCATTCAGGATCCTTGCCAAATATTTCTAGTGGTGACAGCATGGTCCGACATGTTCGTTATCCTTTTAGTCAATCGCTGGACTCAAAACCCACATCCTTACCATGGGAATTTCCTGGAAAGGATGAATTGAAATGTCTAAAATTAGATGAAGACAGAGGAAACCAGTTATCACATGAGGAGCCAGGTGCCAAGGATTACCATGACTCTGGGGAACTCCAAGATACTGTTCTGAAGCTTCCCCTTGGAGATGATCCATCACCACACCACCCTCCCCCTGGTGGAAATTGGAGAATTTGGCCTTTCTCCTTGAGGAGAACAGGATCTAGAAAGTCTATGTTGCCTCCTCCTCCAAGTGATGCCAAAGGCACTACTTTGGGTAATTCTCCAGAGAATACGATTGGCACAGATATGAACAAAAATGACCTCAAACCCAATAAACTGAAAAAGAAGGTTAGGATAACAACTCCAACTTCTGAACAGCTAGCTTCGTTGAATCTGAAGGACGGGATGAATACTGTAACCTTCACTTTCTCTACAGCTGTGCTGGGGAAGCAGCAGGTTGATGCTCGAATATATTTGTGGAAATGGAACACTCGTATAGTGATCTCAGATGTGGATGGTACGATTACAAGGTCAGATGTTCTTGGTCAGTTCATGCCATTGGTTGGTATTGACTGGTCACAGACAGGTGTTGCACATTTATTCTCCGCTATCAAGGAGAATGGCTACCAACTGCTTTTTCTCAGTGCTCGTTCAATTTCTCAGGCCTATATTACTCGACAATTCTTACTTAACCTTAGACAGGATGGAAAAGTTTTACCAGATGGTCCTGTTGTTATTTCCCCCGATGGACTTTTTCCCTCTCTATATCGAGAAGTCATTAGGAGGGTTCCCCATGAATTCAAAATTGCATGCTTAGAGGACATCAAGGCACTTTTTCCTTCTGATTGCAATCCGTTCTATGCTGGTTTTGGTAATAGGGATACTGATGAAATCAGCTACCTTAAGGTTGGAATTCCCAAAGGAAAAATCTTCATTATTAATCCCAGGGGAGAGGTTGTTGTGAACCGTCGTGTTGATGCAAAATCATATACTTCTTTGCATGCTCTCGTGAATGGAATGTTCCCCCCTACGAGCTCTTCTGAGCAGGAGGACTTTAATTCGTGGAATTTTTGGAAACTACCCCCTCCTGCTATTGATATTTGA 2739 0.4418 MQAVGRIISQGVYTVSGPFHPFGGAVDIVVVEQQDGSFKSSPWYVRFGKFQGVLKAREKVVDICVNGVNAGFQMHLDHKGEAYFLREIDSQEEANLLFPSSSGDDADDLSHPRNLRSKSCNYDGDEVVGRAGSRRSRILGLVFGRRSLKRDDGDGDGIGNRVGSLERAEIAANLLDIKWSTNLSAEDGQNVLANSPGDANAVMDNGGLKEESCTDGACSLNGKEVVYDIAGSDVQVACVEVKLVEKELNGEEVSGDNGNDVSTEDVSADGVCRETSETNLDVDCSSEQAPEVMYLAGAGCEEVHVRVQDEVLHGATILLSEGAEAEEVLENAGVGMPILEVSELHSRVQKTDCSDSDDSANNEVDVEEQPTSPKPQTVKKGLGHSLSEKFTPNCVIKPSSYSSLDDHVLDANNTKDNNDSSMLSFPLDSVDDCLLRKMSRRSPSPTSEDENFLFSDLDETVINDRFRRSFSPEHADKEDHVSYENDTKKLAVISSPMAIPRNEAAGEEVGQHSGSLPNISSGDSMVRHVRYPFSQSLDSKPTSLPWEFPGKDELKCLKLDEDRGNQLSHEEPGAKDYHDSGELQDTVLKLPLGDDPSPHHPPPGGNWRIWPFSLRRTGSRKSMLPPPPSDAKGTTLGNSPENTIGTDMNKNDLKPNKLKKKVRITTPTSEQLASLNLKDGMNTVTFTFSTAVLGKQQVDARIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSAIKENGYQLLFLSARSISQAYITRQFLLNLRQDGKVLPDGPVVISPDGLFPSLYREVIRRVPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPKGKIFIINPRGEVVVNRRVDAKSYTSLHALVNGMFPPTSSSEQEDFNSWNFWKLPPPAIDI 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00437 912 PANTHER GH19076P 1 912 - -
Cca07g00437 912 SUPERFAMILY HAD-like 703 853 IPR036412 -
Cca07g00437 912 Pfam LNS2 (Lipin/Ned1/Smp2) 665 887 IPR013209 -
Cca07g00437 912 MobiDBLite consensus disorder prediction 632 650 - -
Cca07g00437 912 MobiDBLite consensus disorder prediction 347 384 - -
Cca07g00437 912 MobiDBLite consensus disorder prediction 618 653 - -
Cca07g00437 912 PANTHER LIPIN 1 912 IPR026058 -
Cca07g00437 912 SMART lns2 711 867 IPR031315 -
Cca07g00437 912 Pfam lipin, N-terminal conserved region 1 93 IPR007651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00437 Cca-Chr7 5794579 5801937 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00437 07 5794579 5801937 Cca07g00437 07 5794579 5801937 ECH
Cca05g00185 05 4155465 4164923 Cca07g00437 07 5794579 5801937 PCT