Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00435 ATGTCTGCTCGGAGTGGACACCAAACGGTTCCCCTTTCGGTGCTGCTGAAGCGCGAGTTGGCCAACGAGAAATTTGAGAAGCCGGAGGTGGTGGTTGTGCACGGCCAAGCTAGCGAGAATAAGAAAGGCGAGGATTTCACGCTGTTGAAGACGGAATGCCAAAGAGTCGTCGGAGATGGGGTTTCTACGTATTCTGTTTTTGGACTATTCGATGGACATAATGGATCTGCTGCTGCTATTTATGCCAAGGAGAATCTTCTAAGCAATGTTTTAAGTGCGATTCCTTCTGATCTTAACAGAGATGAGTGGATAGAAGCATTGCCTAGGGCTTTGGTTGCGGGCTTTGTAAAAACTGATAAAGATTTTCAACAGAAAGCAAAAACATCAGGAACAACTGTAACCTTTATGATTATAGAAGGATGGGTTGTAACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAGTCTTCCGAAGGTGGAATTTATTACTTGTCAGCAGACCATAGACTAGAAAGCAATGAAGAGGAGAGGGTCCGCATCACTTCTAGTGGGGGTGAGGTTGGTCGTCTAAATACAGGTGGAGGCACAGAGGTTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCACGATCAATTGGTGATATGGATGTTGGTGAATTTATAGTTCCTGTACCATACGTAAAGCAAGTAAAGCTTTCCACTGCTGGAGGCAGGGTTATTATCAGCAGTGATGGTGTCTGGGATGCTCTAACTGCAGAAATGGCCCTTGATTGTTGTCGTGGCATGTCAGCAGATGCAGCAGCATCACATATTGTGAAAGAAGCCGTGCAAGCAAAGGGACTTAGAGATGACACAACATGCATTGTTATTGATATATTAGCCCAGGAGAAGCCACCTACTTCTGTGCCAACACAAAAGAAACAGGTAAAAGGAAGGCTTAAGTCCATTTTTCGCAAAAAGTCCTCTGAATCATCTGATATTGACAAACAATACCTGGAGCCAGATGTGTTACAAGAACTATACGAGGAAGGGTCTGCTATGCTTTCAGAGAGGTTAGAAACAAAATATCCACTTTGCAACATGTTCAAGTTGTTTAACTGTGCTGTGTGTCAGATAGAGATAAGACCTGGGGAGGGTATTTCCATACACGAGGGTGCACAAAATCCAGGAAGATCGCGACCCTGGGATGGACCTTTCCTTTGCTCAAGTTGCCAGGAGAAGAAAGAAGCCATGGAAGGGAAGCGAACATCAG 1261 0.4504 MSARSGHQTVPLSVLLKRELANEKFEKPEVVVVHGQASENKKGEDFTLLKTECQRVVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLSNVLSAIPSDLNRDEWIEALPRALVAGFVKTDKDFQQKAKTSGTTVTFMIIEGWVVTVASVGDSRCILESSEGGIYYLSADHRLESNEEERVRITSSGGEVGRLNTGGGTEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSTAGGRVIISSDGVWDALTAEMALDCCRGMSADAAASHIVKEAVQAKGLRDDTTCIVIDILAQEKPPTSVPTQKKQVKGRLKSIFRKKSSESSDIDKQYLEPDVLQELYEEGSAMLSERLETKYPLCNMFKLFNCAVCQIEIRPGEGISIHEGAQNPGRSRPWDGPFLCSSCQEKKEAMEGKRTS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00435 420 ProSiteProfiles PPM-type phosphatase domain profile. 29 295 IPR001932 -
Cca07g00435 420 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 420 - -
Cca07g00435 420 SMART PP2C_4 23 293 IPR001932 -
Cca07g00435 420 SUPERFAMILY PP2C-like 39 295 IPR036457 -
Cca07g00435 420 Gene3D - 27 302 IPR036457 -
Cca07g00435 420 CDD PP2Cc 40 295 IPR001932 -
Cca07g00435 420 SMART PP2C_SIG_2 48 295 IPR001932 -
Cca07g00435 420 PANTHER ALPHABET, ISOFORM E-RELATED 2 420 - -
Cca07g00435 420 Pfam Protein phosphatase 2C 59 279 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00435 Cca-Chr7 5764558 5768441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00435 1 420 PP2C-type Phosphatase Gene Family AT1G47380 77.197 0.0 696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00435 07 5764558 5768441 Cca07g00435 07 5764558 5768441 ECH
Cca05g00187 05 4214209 4218883 Cca07g00435 07 5764558 5768441 PCT