Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00387 ATGAAATCAAAGGCAAGAAGACCAAAATCAAAACCACTCATATTGTTTCTCATTCTGTCCCTCTTCATACTTGCAGCTTCAACATCGTCCTCCAACGAGGCGAAAGCAAAGAGTAACAATATTAGCCGCCAATTCAAAGAAGCCCCCGAATTCTACAACTCCCCGAAGTGCGGGTGGATGAGCGAGAGTTTGATATGTTCGGAGGAGGCAGTACAGGTGGCAATGACGCTGGACACGACCTACATCCGAGGATCGATGGCGGCGATCCTTTCGGTCCTCCAACACTCGTCATGCCCGCAAAACATATTCTTCCACTTGGTGTGCTCCTCCAGCGCGTCCCTCCTACGCGCCGCAATCTCAAACACATTCCCGTACCTTAAATTCAACCTCTACACGTTCGACGAATCCCAGGTGTCGGGCCTGATCTCCACCTCCATCCGCTCCGCACTGGATTGCCCCCTCAACTACGCCCGCTCCTACTTAGCCAACCTCCTCCCGCTGTGCGTGCGACGCGTCGTTTACTTGGACTCCGACCTCATCCTCGTAGACGACATTGCCAAGCTGGCACAAACGCCCTTGGGGGAAAACGTGGTCCTGGCCGCACCCGAATactgcaacgccaacttcacctcctacttcaccccaacCTTCTGGTCCAACCCTTCGCTCTCGCTTACGTTCGCCGATAGGAGGCCCTGCTACTTCAACACGGGGGTCATGGTCATCGATCTCCAGCGCTGGCGCCACGGGGATTACACCACCAAGATCGAGGACTGGATGGAGCTCCAGAAACGGATCAGAATCTACCATTTGGGCTCTCTTCCCCCCTTTCTCCTTGTCTTCGCCGGGAACATTGCTTCCGTCGATCACCGCTGGAACCAGCATGGCCTCGGCGGGGATAACTTTCGTGGCCTTTGCAGAGATCTCCATCCTGGGCCTGTTAGCCTTTTGCATTGGAGCGGCAAAGGTAAGCCCTGGGCTCGATTGGACTCCAACAGGCCTTGCCCTTTGGATGCGCTTTGGGCTCCCTATGATCTTTTCCAAACTCCCTTCTCCTTCGATTCTTGA 1068 0.5281 MKSKARRPKSKPLILFLILSLFILAASTSSSNEAKAKSNNISRQFKEAPEFYNSPKCGWMSESLICSEEAVQVAMTLDTTYIRGSMAAILSVLQHSSCPQNIFFHLVCSSSASLLRAAISNTFPYLKFNLYTFDESQVSGLISTSIRSALDCPLNYARSYLANLLPLCVRRVVYLDSDLILVDDIAKLAQTPLGENVVLAAPEYCNANFTSYFTPTFWSNPSLSLTFADRRPCYFNTGVMVIDLQRWRHGDYTTKIEDWMELQKRIRIYHLGSLPPFLLVFAGNIASVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDSNRPCPLDALWAPYDLFQTPFSFDS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00387 355 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 19 355 - -
Cca07g00387 355 Pfam Glycosyl transferase family 8 73 328 IPR002495 GO:0016757
Cca07g00387 355 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 72 335 IPR029044 -
Cca07g00387 355 SUPERFAMILY Nucleotide-diphospho-sugar transferases 72 346 IPR029044 -
Cca07g00387 355 PANTHER HEXOSYLTRANSFERASE 19 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00387 Cca-Chr7 5077093 5079049 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00387 07 5077093 5079049 Cca07g00387 07 5077093 5079049 ECH
Cca05g00244 05 5190418 5191737 Cca07g00387 07 5077093 5079049 PCT