Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00377 ATGGCCATGGAGTCCGAACTCAAAGACCTCAATTCCAAGCCCCCCAACGGCCACACCGTCACCGACCACCGTCCTCTGCTCAAGTCCGACTCCACCGTCTCCTCCTCCGCCGACACCATCGCCGAGATGGAGAAGAAGTTCGCCGCCTACGTCCGCCGCGACGTCTACGGCACCATGGGGCGCGGCGAGTTGCCGCCCAAGGAGAAGCTCCTTCTCGGTTTCGCTCTGGTTACTCTTCTCCCCATAAGAGTTGTTCTGGCCTTCACAGTCTTGCTCCTCTATTACTTAATTTGTAGGCTTTGCACTCTCTTCTCTTCGCCCAATCGCGACGAGGAGCAGGAAGATTACGCTCACATGAGTGGTTGGAGGAGAACCGTTATTGTTTCATGTGGACGCGCCCTCTCCAGAGTCATGCTCTTCGTTTTCGGCTTTTATTGGATTTCGGAGTCCAACTTCCCCTCTCAGTCTCAGGAAGACAAGGATCAACCTGAAGAGTTGGGGAGACCTGGAGTAATAATATCTAATCATGTGTCATACTTGGATATTTTGTATCACATGTCATCATCATTCCCAAGTTTTGTTGCCAAGAGATCAGTGGCTAAACTTCCTCTTGTTGGTCTCATCAGCAAGTGCCTTGGTTGTGTATATGTTCAGCGGGAATCAAAGTCATCAGACTTCAAGGGTGTTTCAGCTGTTGTCACTGATAGAATCCGAGAAGCTCATCAGAACAAATCTGCTCCATTAATGATGTTATTTCCAGAAGGTACAACGACAAATGGAGAGTACCTCCTTCCATTCAAGACTGGTGGTTTTTTGGCAAAGGCACCAGTACATCCTGTGATTTTAAGATATCATTACCAGAGATTTAGTCCCGCTTGGGATTCCATATCTGGGGTACGCCATGTGATATTTCTCCTCTGTCAGTTTGTGAATTATATGGAGGTGATTCGATTACCTGTTTATCATCCTTCACAGCAGGAGATGGATGATCCCAAACTATTTGCTAATAACGTTAGAAGGTTGATGGCTACTGAGGGTAACTTGATACTTTCTGATATTGGGCTAGCTGAAAAACGAATATATCATGCCGCTCTCAATGGTTTGTTTTCCCAATGCTAA 1119 0.4718 MAMESELKDLNSKPPNGHTVTDHRPLLKSDSTVSSSADTIAEMEKKFAAYVRRDVYGTMGRGELPPKEKLLLGFALVTLLPIRVVLAFTVLLLYYLICRLCTLFSSPNRDEEQEDYAHMSGWRRTVIVSCGRALSRVMLFVFGFYWISESNFPSQSQEDKDQPEELGRPGVIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSAVVTDRIREAHQNKSAPLMMLFPEGTTTNGEYLLPFKTGGFLAKAPVHPVILRYHYQRFSPAWDSISGVRHVIFLLCQFVNYMEVIRLPVYHPSQQEMDDPKLFANNVRRLMATEGNLILSDIGLAEKRIYHAALNGLFSQC 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00377 372 CDD LPLAT_LPCAT1-like 136 359 IPR045252 GO:0008374
Cca07g00377 372 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 23 368 - -
Cca07g00377 372 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 70 352 - -
Cca07g00377 372 MobiDBLite consensus disorder prediction 1 31 - -
Cca07g00377 372 SMART plsc_2 170 285 IPR002123 GO:0016746
Cca07g00377 372 PANTHER PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN-RELATED 23 368 - -
Cca07g00377 372 Pfam Acyltransferase 164 273 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00377 Cca-Chr7 4896223 4902514 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00377 07 4896223 4902514 Cca07g00377 07 4896223 4902514 ECH
Cca05g00259 05 5524229 5532489 Cca07g00377 07 4896223 4902514 PCT