Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00376 ATGGAGAGGTTTCCTTCTTCTGAACGAGAGAGCATTGTTTTAGGGTACAGAGAGAGTGAGTCGTTGATTGGGAGGTCGTCGTCGAGCAATTCGATGTTGGAGGTGGATTTCAAGGACGTGTTTGGAGGGCCTCCGCGGCGGTCATCGATGAACGAAGGGGAAAGAGGTTGGTGTAGGTGGCCTCCGGAGAGGGTGTTTGGGGAGGAGAGTGGGAATCGGAGGCGTAATGACGACTTCTTCGATGACATATTCGGAGGTGAGGAGTCAGCAAGTGTGTGTTCCACGCCAAACAACAATTTCGCTCTCTCCCGAGTCTCCAgccctctgccctctgcgcctcattcacttccctctctcccgctaccctTCAGCCTTCCTGCCAAATTGACAAATGGAGTGGACCTTCCAACATTTGGTTCCCCCAACAACACCAGCGATGCTTCAAATGGATATGGCCTTTCAGATTCCCATCTATCCAGATTTTCACCCCATCGTAAGGAGTTGAAAAATGAGTTAAAACCTTACCGACAAAGTCTTCTATCACAAGAATTTTCGAACTCGAGCACATCTGATAAAGCAGACAAAGGAAGCATTATGAAACAAGACATATCTATTGGTGATGTTTCCCCTAATACCAGTAATAGCCAGTTCCATTTCTCAATATATAAATGGGCAAGTAAAGGGGTGCCAATGATGATGCCTCTTAGGACAGAGAGAACCTCAAGGACTAAGGATAAGGTTAAACTTGAGAGATGCTCAAGCGCTAAGGAATGGAGGGTCGGTGAGACTACCACACAAAATCCTGTAGTGTACAATGATTCCTCTTTAATGAGTAATAGAAAACAAGATGTGTCAACTACTTCCACAGCCACTGAAAATCGAGCAGATTCAAACCAGATTGTAGAACAAGTAGTTTCTGCCAAAGCTCAATCAGGTACATCGAGTATCCCTCAAACTGATACTAAAGATGTGGAAGTAGAATCAAGTAATCATTCTGGAAAAACTGAGGCAGCAAGGGAAACGCAGAAGCTTGAGTCTAAGCCATTACAATTTCTGTTCAAAGAAAGTGAAAAGAAACTAGATAATGATATGATTACTAGGGAGAGAGACGAAAACAGGATGAAAAGCACCAAAAAGTTGTCTGCTGTTTTTGATGTTACTGTGAATCCAATGAAACAAGAAGAAAAGACAGTTTTCTCGAGAGATGTAGGACATACCACTTCTCAGGGTTCATTGAGATTAGGCGAGAATATGGGGAAAGGCCTAGTTAAAGGGAAGGTCAAAGAATTCGCTCGAATTTTCAACCAAGAAGCTGTAACAAAACCCAAAGTTGACTCCAAATCTCTACCTCAGGGTTCTACTTACAAGCAGAGAGATGCTTTAAAGACAAATAATGAAGTGGAAAGTGTTCCTGAACAATCCAAGAAGGAGAACTCTGCCATGGAGACCACCAACATCTCTGCTAATAATTTGTCTCATCAAAATGATATCTCAGCGCAAGCAGCAATTCCTGATATATCATTTACTGTTATTGGAGATAAAGACGAGTCCTTCAATGGGAGTTTCATGATACAAGTATTAGACGAAGATGAGGGTGAGGTCTTACAAAACCAAGAAAATCAAGAAATCCAAATGATTGACAACAAGATACGACAATGGTCTAAAGGGAAGGAAGGAAACATACGCTCCCTGCTATCGACATTACAATATGTACTTTGGCCGGAGTGTGGATGGAAGCCTGTGCCTCTTGTTGATATAATTGAAGGGAACGCCGTGAAAAGAGCATATCAAAGAGCTTTACTCTGTCTGCATCCAGATAAGTTGCAGCAAAAGGGAGCTTCTTCAGATAAAAAATATATTGCAGAAAAAGTTTTTGATATTTTACAGGAGGCATGGACTCAATTCAATATGCTCGGTGCACTCTAA 1926 0.4102 MERFPSSERESIVLGYRESESLIGRSSSSNSMLEVDFKDVFGGPPRRSSMNEGERGWCRWPPERVFGEESGNRRRNDDFFDDIFGGEESASVCSTPNNNFALSRVSSPLPSAPHSLPSLPLPFSLPAKLTNGVDLPTFGSPNNTSDASNGYGLSDSHLSRFSPHRKELKNELKPYRQSLLSQEFSNSSTSDKADKGSIMKQDISIGDVSPNTSNSQFHFSIYKWASKGVPMMMPLRTERTSRTKDKVKLERCSSAKEWRVGETTTQNPVVYNDSSLMSNRKQDVSTTSTATENRADSNQIVEQVVSAKAQSGTSSIPQTDTKDVEVESSNHSGKTEAARETQKLESKPLQFLFKESEKKLDNDMITRERDENRMKSTKKLSAVFDVTVNPMKQEEKTVFSRDVGHTTSQGSLRLGENMGKGLVKGKVKEFARIFNQEAVTKPKVDSKSLPQGSTYKQRDALKTNNEVESVPEQSKKENSAMETTNISANNLSHQNDISAQAAIPDISFTVIGDKDESFNGSFMIQVLDEDEGEVLQNQENQEIQMIDNKIRQWSKGKEGNIRSLLSTLQYVLWPECGWKPVPLVDIIEGNAVKRAYQRALLCLHPDKLQQKGASSDKKYIAEKVFDILQEAWTQFNMLGAL 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00376 641 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 635 - -
Cca07g00376 641 PANTHER J DOMAIN-CONTAINING PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1 1 635 - -
Cca07g00376 641 Gene3D DnaJ domain 537 640 IPR036869 -
Cca07g00376 641 MobiDBLite consensus disorder prediction 57 72 - -
Cca07g00376 641 MobiDBLite consensus disorder prediction 446 460 - -
Cca07g00376 641 MobiDBLite consensus disorder prediction 461 475 - -
Cca07g00376 641 MobiDBLite consensus disorder prediction 324 343 - -
Cca07g00376 641 MobiDBLite consensus disorder prediction 40 72 - -
Cca07g00376 641 MobiDBLite consensus disorder prediction 441 482 - -
Cca07g00376 641 MobiDBLite consensus disorder prediction 307 323 - -
Cca07g00376 641 SUPERFAMILY Chaperone J-domain 531 635 IPR036869 -
Cca07g00376 641 MobiDBLite consensus disorder prediction 136 156 - -
Cca07g00376 641 MobiDBLite consensus disorder prediction 136 159 - -
Cca07g00376 641 MobiDBLite consensus disorder prediction 307 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00376 Cca-Chr7 4886863 4894303 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00376 07 4886863 4894303 Cca07g00376 07 4886863 4894303 ECH
Cca05g00299 05 6274785 6282753 Cca07g00376 07 4886863 4894303 PCT