Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00369 ATGGCTGACCGCACCTCCGTCACTCCCCTCCACATCTCTGCCGCACCTCCCTTTCCGATCCCCAAAGATTTCCATGGCCCTGACAATCCGATTCCACTTTCACCACAGTGGCTTCTTCCAAAGCTAGGGGAGAGTAAATCTGCAATAGGAACTGTGGAAAACCCTGTGATCTCAACTCCACCAAATGGCAATCGCTCAGAGACTTTTAAGACATCTGGAAATGGAGAGGATGTGAATGATGGCCATAAGAAAAAGGATGTCTTTCGACCATCCATGTTTGACTCTGAAAGTGGACGCCGTGACCATTGGCGTGATGAAGAGAGAGATACTAAGTCCTCCATACACAAGGATCGCTGGAGGAGTGGAGACAAAGACCCCAGTGACACTAGGAGAATGGATCGAAGGACTGAAAATTTATCCACGAGGCACTTTGGAGAAGCACGCCGTGGCACATCTGATAGATGGAATGATTCAGGCAATAGAGAAACAAACTTTGAACAGCGACGTGAGAGTAAGTGGAACACACGCTGGGGTCCTGGTGATAAGGAGCCAGAAGGTCTTCGTGAAAAATGGAGTGACTCTGGTAAAGATGGTGATCTGCATGTGGAGAAAGGTTTGTCTAACATTTTTAATCTTGTTAAGGATGAAAAGGAAGGAGATCATTATCAGCCATGGAGACCTAACTCCTCACAAAGCCGTGGAAGGGTAGAGCCTACCCATCACCCGAATGTGACACCAAACAAACAAGCGTCTGCGTTTTCATATGGGTGGGGCCGTGGGGAAGATACACCTCCAGTCATTTCTTTTGGACGTGCTCGTCTTGGCTCTGGTGGTAACTCTATTAATGGCACATATATGCATTCTCAATCTGGGATTTTAGTGGATAAAGTTGAATTTGAGCATGGAGAAGCTCATCACTTTAGATATAGCAGGACAAATTTGCTTGATGTGTACAGAGTCGCAGATAAGCAAACAAATAGAAAACTAGTGGAATTTGTGCAGGTGCCTTCTATTACACAGGATGAACCATTGGAACCTCTTGCTCTTTGTGCACCAAATTCTGAGGAACTGTCTGTATTAAAGGATATTGACAAAGGGGAAATAATTAGTAGCGGTGCACCTCAGGTGCCAAAAGATGGACGGAACCCAACAGAATTTATGCATTCAAGACGAACGAATCTTGTAAATGCACATTTCCAAGATAGAGCTGAAGATACTGGTTCTTACAAAATGGCTGCTGTGGTTCCTAGAAATAAAGAATCAACCTATGAAGAAAGTAATTCTGTTCATCTTAGTGCTACATGGCATGGCACTCCTCTTGGTGAACATGCAGGCACACTCATGCATGATAGCAGAGACATCTCTGGTGATATTAAATCAAGAAACTCAGAAATGAGCCGGTCACACCAGCCAAAAGATACTCATGTGGCTAAGTGGAAATCTAATGGGGATCCCATTAAGAGGCAGTTATCTGGCATTTTGGACAGTGAATTTGAATCCAGGAGAGTTCAACAGACTTGTCCAGAGGAGTTATCACTCTTCTATAAAGATCCTCAGGGTCGCGTTCAGGGTCCATTTAAAGGAATAGATATTATTAGTTGGTTTGAGGCTGGATACTTTGGCATAGATTTGCCTGTTCGCCTGGAAAATCCAGCATCTGACTCGCCATGGCTACAACTTGGTGATGCCATGCCCCATTTACGAGCTAAGGCCGGACCCCCACCTGGATTTCCTGCTGCAAAACTTGACACTACAGAGGCATCTGGGCAGCAAAATTCCAGTACCTTTGGGAACATGCATACTGGTTTAAGTGAGGTTGAGATGCTGAGAAATGATTCTATGCATAGGAGTTCTACTACAGAAGCTGAAAATAGGTTTTTGGAATCACTGATGTCTGGTGGCAAGAGCAGTTCCCCACTTGATAGTCTCACCCTACCAGAAGGTTTACAAGGGTTTCTTGGTAATAATTCTGTTAATTTGGGCCCATCAGTGGATAGTGGGAACCTTTACTTGCTGGCCAAGAGGATGGCACTTGAACGACAGAGATCCGTACCCAATCCTTATATGTCCTGGCCAGGGAGGGATGCAGCATCACTTCCACCAAAATCAGACATTTTTCCAGATGCATCACCACATTCAAATATCTTGTCTGACAATTCTTGTCAGCTTCAGTCCCAAAATTCTGAATTGATATCAATAATCCAAGGATTATCTGATAGATCAACCACAGGCTTAAATAATGGCATTGCTGGTTGGCCAAATTTTCCTTTGCATGGTGGATTGGATCCTATTCAGAATAAGATTAACTTGCATCATGATCAAAATTATGTTCAAATGCCATTTGGAATTCAACAACAAAGGTTGCAAACACCAAATCAATTGTCCTTAAATAACTTAATTGCTCAAACTTCGGATATTCCATCTAGTATTTTGACAGCAGAGAAGTTGCTTTCTTCTGGTTTATCACCAGATCCCCAAATGTTGAATATGTTGCAGCAGCAACACTTGCTACAGTTGCATTCTCAGGCAGCTGCTCCTTCACAGCCAATGCCTTTGTTAGATAAAATTTTATTGCtgaagcagcaacagcatcaggaggagcaacagctgttattgcgtcaacaacagcaactgctttctcaagtactgcaggagcatcagtctcaccagcaCTTTGGTGATTTATCGTATAAACAGTTGCAGGGAGGTGGAATACCTCTGGGGAATTTGCATGTGGGTCTTTCTCAAATTCAACCACCTAAAGAGATTTTTCCCATGATGCATGATGAGCTTACTACTAATTCTTTGGATTTACCGCTGAGTGTTAGCCAGGACACTAGCTATAATATAAGCAGTGAATCTTCTGCCCAGCTGCCTGACCAATTATTTGAGAATATAAGTCATCAAAACAGCTGGGGTGCTACACATCCTGAGCAAATTAATTACAAGTCCCAGAAGGAAACATTGCCTGTATCAGCTTCTGTTGAAGGTTCCCCATTGCATGAACTGAACAGAGCCAAAGAGGAACCTGACATTGCCCAGAATCCTCTATCCTTTTCTGACTATACTGCTAAATCCATCAAGCAGATGCCAGACAGTACTTGTGCTGTTGATGTGCATGTGAGTGCAACTTCCGAGTCTGGTCAGAAATCTCATCCTGAACAGTGTGTTGCACCAGTTGCTGTGTCAGCAGGTGGATCTTATGGTCCTGGGTTACCACTAGGTAGTCAATTGAGTAAAGATGTGGAGATTAAACCAGATAGTCTTGAAGAGCAGCAGGGTGGGCAAGACAGCTCAAATATTGAGTCCTCTGTGGCAGATGTAAGAAGTGTTGAAGCACCTGAACCCAAAAAACCTACTGAGAAGAAATCTAAGAAGCAAAAACCTTCTAAATCTCAGTCTTCTGATCAGGCAAAGGGACTGCTAAAAAATGTGACTTTGCAGCAGTCCAAGAAGTCAGAAACTGAGAAGCCGAATCATAGTGAAAGAAATTTGGGAGAAGGCAACAAGGGTGAACCAGTTCATGAAACATATCTTCAACAAACAAGGGGTAAGGGTAAACAATCTGCAATTGTTACTGCAGAAATTGATGATCATCAAGAAGTGAGTGGTCGCTCTACTAATATTCCAGGAAACATCACTGAAACAGTTGTTGAGAATGAGTTGAAGGCAGTCAGTTCTGTTGCCACACAGAATACTGAATTACCTTCAGGGAGAGCTTGGAAACCTGCTCTAGGTTTCAAGGCAAAATCTCTCTTAGAAATTCAACTGGAAGAACAAAAAAAGGCACAGACCGAAATGCTTGTATCTGAGGTTGCTACTAATCCTGTCAATTCCATGAGCTCAACATCTCCCTGGGTTGGAGTTGTGGCCAATCCAGACTCTATGAAGGTATCTAGTGATAGGCGCAGAGAAGCAGATAATACTGAATATCTGGCTAAATCTCAAAATAGTAAAAGCAAGAAAAGCCCATTGCATGATCTATTGGCAGAAGATGTACCAAAATCTAGTGAACGAGATGATAAGGTTCCAGTTAGTATGCTCCCCTCACAAAATATAGCTGTTCATTCAGAACCACTAGATGATGGAAACTTTATTGAAGCTAAAGACACTAAAAGAAACCGGAAAAAATCTACAAAGTCAAAGGGTTCAGGAGCTAAGGTCTCGATGTCAGTTGCTTCTAGTGAAGTGCCCACAAGTCACATTGAAAAGGGAAAAAGCTCCCGCTCTATTCAGCAGGATAAGGAACTACTGCCTGCCATCCCTTCAGGACCCTCTCTGGGAGATTTTGTTCTTTGGAAAGGAGAGCCAACAAGCCCATCTCCTCCTCCAGCATGGACTACTGATTCCGGTAGGATTCCAAAACCTACATCCTTAAGAGACATTCTAAAGGAAGAGGAAAAGAAGTATGTTCTCCCACACCAACTGCCTACACCTCATAAATCACAGCCTGCCCAACCTGCACGGAGTAGTGGTTCTTTACGGTCAATTACAGCTTCATCTCCATCAAAGACTGTGCCTTCTGGCCAGATGAACTCCCAAGCTTCTCTGTCAACATACAGAGTGGATGATGAATTGTTTTGGGGTCCAGTTGAGCAATCTAAGCAAGAAAATAAGCACAGGTCAGATTTTCCTCAGGTTGCTAGTCAGGGAAGCTTGGGTTCTAAAAGTGTTTCCATGAAAGGTAATTCACCTGGATCATTGAGTCGACAAAAATCTGGGAGTGGCAAACCAATTGAGCGGTCTTTATCATCATCACCTGCCTCTTCTCAATCTCTGCTAAAACAGGAAAAAGATGCAATGACCAGGAATTCCGAAGCCATGGACTTTAGAGTTTGGTGCGAGAATGAATGCGTTAGGCTTATTGGGACCAAAGATACAAGTTTCCTTGAGTTTTGCTTGAAGCAGTCCAGATCTGAAGCAGAGATGTATCTCGTAGAAAACCTGGGATCATATGACCCTGATCATGAATTCATTGATAAATTCCTCAATTACATGGACTTACTATCATCAGATGTTTTGGATATAGCTTTTCAAACCGTGAATGATCAGAAAGTTGCTGGAGGCATGATATACGGAAATACAGATGTACAGGATCTAGGTTACTATGATGGATCCTTCCCAAAAGTTGGAAAGAAGAAAGGTAAGAAAGGAAAAAAGGTTAGCTCTTCAGTTTTGGGATTCAATGTCGTGAGCAACCGGATAATGATGGGTGAGATCCAGACTGTAGAAGACTAA 5238 0.4215 MADRTSVTPLHISAAPPFPIPKDFHGPDNPIPLSPQWLLPKLGESKSAIGTVENPVISTPPNGNRSETFKTSGNGEDVNDGHKKKDVFRPSMFDSESGRRDHWRDEERDTKSSIHKDRWRSGDKDPSDTRRMDRRTENLSTRHFGEARRGTSDRWNDSGNRETNFEQRRESKWNTRWGPGDKEPEGLREKWSDSGKDGDLHVEKGLSNIFNLVKDEKEGDHYQPWRPNSSQSRGRVEPTHHPNVTPNKQASAFSYGWGRGEDTPPVISFGRARLGSGGNSINGTYMHSQSGILVDKVEFEHGEAHHFRYSRTNLLDVYRVADKQTNRKLVEFVQVPSITQDEPLEPLALCAPNSEELSVLKDIDKGEIISSGAPQVPKDGRNPTEFMHSRRTNLVNAHFQDRAEDTGSYKMAAVVPRNKESTYEESNSVHLSATWHGTPLGEHAGTLMHDSRDISGDIKSRNSEMSRSHQPKDTHVAKWKSNGDPIKRQLSGILDSEFESRRVQQTCPEELSLFYKDPQGRVQGPFKGIDIISWFEAGYFGIDLPVRLENPASDSPWLQLGDAMPHLRAKAGPPPGFPAAKLDTTEASGQQNSSTFGNMHTGLSEVEMLRNDSMHRSSTTEAENRFLESLMSGGKSSSPLDSLTLPEGLQGFLGNNSVNLGPSVDSGNLYLLAKRMALERQRSVPNPYMSWPGRDAASLPPKSDIFPDASPHSNILSDNSCQLQSQNSELISIIQGLSDRSTTGLNNGIAGWPNFPLHGGLDPIQNKINLHHDQNYVQMPFGIQQQRLQTPNQLSLNNLIAQTSDIPSSILTAEKLLSSGLSPDPQMLNMLQQQHLLQLHSQAAAPSQPMPLLDKILLLKQQQHQEEQQLLLRQQQQLLSQVLQEHQSHQHFGDLSYKQLQGGGIPLGNLHVGLSQIQPPKEIFPMMHDELTTNSLDLPLSVSQDTSYNISSESSAQLPDQLFENISHQNSWGATHPEQINYKSQKETLPVSASVEGSPLHELNRAKEEPDIAQNPLSFSDYTAKSIKQMPDSTCAVDVHVSATSESGQKSHPEQCVAPVAVSAGGSYGPGLPLGSQLSKDVEIKPDSLEEQQGGQDSSNIESSVADVRSVEAPEPKKPTEKKSKKQKPSKSQSSDQAKGLLKNVTLQQSKKSETEKPNHSERNLGEGNKGEPVHETYLQQTRGKGKQSAIVTAEIDDHQEVSGRSTNIPGNITETVVENELKAVSSVATQNTELPSGRAWKPALGFKAKSLLEIQLEEQKKAQTEMLVSEVATNPVNSMSSTSPWVGVVANPDSMKVSSDRRREADNTEYLAKSQNSKSKKSPLHDLLAEDVPKSSERDDKVPVSMLPSQNIAVHSEPLDDGNFIEAKDTKRNRKKSTKSKGSGAKVSMSVASSEVPTSHIEKGKSSRSIQQDKELLPAIPSGPSLGDFVLWKGEPTSPSPPPAWTTDSGRIPKPTSLRDILKEEEKKYVLPHQLPTPHKSQPAQPARSSGSLRSITASSPSKTVPSGQMNSQASLSTYRVDDELFWGPVEQSKQENKHRSDFPQVASQGSLGSKSVSMKGNSPGSLSRQKSGSGKPIERSLSSSPASSQSLLKQEKDAMTRNSEAMDFRVWCENECVRLIGTKDTSFLEFCLKQSRSEAEMYLVENLGSYDPDHEFIDKFLNYMDLLSSDVLDIAFQTVNDQKVAGGMIYGNTDVQDLGYYDGSFPKVGKKKGKKGKKVSSSVLGFNVVSNRIMMGEIQTVED 1745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00369 1745 MobiDBLite consensus disorder prediction 1543 1598 - -
Cca07g00369 1745 CDD GYF 510 567 IPR003169 GO:0005515
Cca07g00369 1745 ProSiteProfiles GYF domain profile. 510 561 IPR003169 GO:0005515
Cca07g00369 1745 MobiDBLite consensus disorder prediction 1091 1106 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 1 37 - -
Cca07g00369 1745 SUPERFAMILY GYF domain 500 567 IPR035445 -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 1479 1513 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 1533 1600 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 76 199 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 1320 1342 - -
Cca07g00369 1745 SMART gyf_5 511 566 IPR003169 GO:0005515
Cca07g00369 1745 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1745 - -
Cca07g00369 1745 Pfam GYF domain 514 551 IPR003169 GO:0005515
Cca07g00369 1745 MobiDBLite consensus disorder prediction 224 249 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 218 249 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 1383 1406 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 1276 1513 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 52 199 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 1133 1152 - -
Cca07g00369 1745 Gene3D - 499 575 IPR035445 -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 52 75 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 1088 1190 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 1111 1132 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 1153 1170 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 1458 1474 - -
Cca07g00369 1745 MobiDBLite consensus disorder prediction 14 28 - -
Cca07g00369 1745 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00369 Cca-Chr7 4788401 4797289 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00369 07 4788401 4797289 Cca07g00369 07 4788401 4797289 ECH
Cca05g00267 05 5626064 5634469 Cca07g00369 07 4788401 4797289 PCT