Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00350 ATGGGAGCCGAAAGCTTTTCCCATCACCGCCCCTTCGTTCTCGGCCTCCAGCCATCCGCCCTCGTCGACACCGTCGCCACCGTCGATTGGTCCTTGCTCCACCAGATTCCCGGCGAACGCGGTGGCTCCATCCCTGTCCGTTTTCTCTCTCTTTCAATTACGCCTTTCCTTTCTCTTCCCTTAATCACTAATTATAATGCGCTTAACTCAATTCCCTCTTCATATAGGTTGCCATTGAAGAACTCGAATACATACTCAAGGAGCTTAAATCCAATTCTTCCATccttgtgtatgcagccgcAAGGACACACTGCACAGTGTGTTTGCTTGGTTGATGACATGGGTAACCGTACAATGCGACCGTGTCTCTCAAATGCTGTCAAAGTTCAGGCACAAGAATTGACGAACGCGGATTTCAAGGGATCCAAGTGGTTGGTGTTGAGATATGCAGTACTCAACTTGGAAGTTATTCAAGCAGCAATTCACTTAGCCAAACAGGAAGGCCTCCTTGTTTCGTTGGATTTGGCCAGTTTTGAGATGGTCAGGAACTTTAAAGTACCGCTTCTAAATCTGCTGGAATCAGGGAATATAGACCTTTGCTTTGCCAATGAGGATGAGGCAGCTGAACTTTTAAGGGACGAACAGAATGCTGATCCTATAGCTGCTGTAGAATTTCTTTCCAAATACTGCCAATGGGCCGTGGTAACATTGGGCCATAATGGGTGCATTGCTAAACATGGAAAGGAGATGATACGTGTCCCGGCCATTGGGGAAGCAAAGGCAACTGATGCTACAGGAGCAGGGGACCTTTTTGCAAGTGGATTTTTATATGGAGTGGTCAAGGGTTTGTCACTAGAAGAATGCTGCAACATAGGTTCATGCAGTGGGGGATCTGTTATCCGGTCTCTTGGGGGCGAGGTAACATCGGAGAATTGGCAATGGATGTACAAGCAGATGCAGATAAAGGGTCTTCCCACACCTGTAGAAGATGTATGCAATTGA 1002 0.4631 MGAESFSHHRPFVLGLQPSALVDTVATVDWSLLHQIPGERGGSIPVRFLSLSITPFLSLPLITNYNALNSIPSSYRLPLKNSNTYSRSLNPILPSLCMQPQGHTAQCVCLVDDMGNRTMRPCLSNAVKVQAQELTNADFKGSKWLVLRYAVLNLEVIQAAIHLAKQEGLLVSLDLASFEMVRNFKVPLLNLLESGNIDLCFANEDEAAELLRDEQNADPIAAVEFLSKYCQWAVVTLGHNGCIAKHGKEMIRVPAIGEAKATDATGAGDLFASGFLYGVVKGLSLEECCNIGSCSGGSVIRSLGGEVTSENWQWMYKQMQIKGLPTPVEDVCN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00350 333 PANTHER CARBOHYDRATE KINASE-LIKE 9 48 - -
Cca07g00350 333 PANTHER CARBOHYDRATE KINASE-LIKE 99 322 - -
Cca07g00350 333 Gene3D - 92 311 IPR029056 -
Cca07g00350 333 SUPERFAMILY Ribokinase-like 96 305 IPR029056 -
Cca07g00350 333 PANTHER SUGAR KINASE 9 48 - -
Cca07g00350 333 PANTHER SUGAR KINASE 99 322 - -
Cca07g00350 333 CDD adenosine_kinase 11 304 - -
Cca07g00350 333 Pfam pfkB family carbohydrate kinase 99 305 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00350 Cca-Chr7 4629792 4635380 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00350 07 4629792 4635380 Cca07g00350 07 4629792 4635380 ECH
Cca05g00297 05 6241265 6245065 Cca07g00350 07 4629792 4635380 PCT