Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00288 ATGGGTTCGGTTTCTCTGAAAATAAGCGACGGAAGTGCGAGATTCAAGAGAGCATCACTCTGTTCCTCCGCACTCATCAACACTCTCATGATCTTCTCTGTCATCATCACCAACCTCTTCGCCCTCTACGCCTTCACTTCTTCCCctcacactcacactcacacccacctcccacttcacaAAAACTTCTCCCTCATCTCAGAACAAGTCACCCTCATTCTCCGAGAGATCAATTCCTCTCAGAACAAACTTGCCCAGATACAAAAACACCTTCTCGGCTACCAAAGCCTCGACCTTTCCCGACCCAACATTCCAAGCGAACTCAAACTCTTCCTCCACCATCACCACCTCCCTCTCGGCAAAGACTCCAAAACTGGAATCACCCAGATGGTCTCATCCATTGGCCACACCTGCCACAAATCCTCTCACTTGTTGTCTCACTACATGACTTACAACGTTTCCAAACCCTGCCCCGATGATTGGAGCATCGCACAGAAACTCATTTTGCGAGGGTGTGAGCCTCTCCCTAGAAGAAGGTGTTTCGCCAAAACCATTTCCAAGGCTAATCTTCTCCACCCTTTTCCCACCTCGCTTTGGAAGCCTGTTGCCAACAAAACCGTTAACTGGAGTGGTTTAAGTTGCAAGAGTTTTGAGTGTTTGAGTGGTAAAAAGTTGAGTAGGGATTGCATTGGTTGCTTTGACTTGGTGAATGGGTACGAGAATGAGAGGTTTGTGAGGTCAAGGAGTAAGAGTGATTTTGTGGTTGATCAAGTGTTGGCATTGGGAAGTGGTGGGGTTAGGATAGGGCTTGATGTTGGAGGCGGTTCTGGATCCTTCGCTGCTGTGATGGCCGAGAGGAATGTTACTGTGGTTACTATCACTTTGAATGTTGATGCTCCTTTCAGCGAGTTCATTGCTGCAAGAGGGCTTTTTCCTCTCTTTTTAAGCTTGGATCATAGGTTGCCGTTCTTTGACAATGTGTTTGATTTGGTGCGTTGTGGGAGTGGCTTGGATGGTGGAGGGAGTCCAGAGAAGTTGGAGTTTTTGATGTTTGATGTTGATCGCGTTTTGCGGGCTGGTGGGTTGTTTTGGATGGATAACTTGTGTTATGTTGATGAAGAGAAGAAGAGGGTGTTGACTAGGTTGATTGAAAGGTTTGGCTACAAAAAGTTGAAGTGGGTTGTGGGAGATAAGAGTGTTGGATCAGCCAAGTCTCATGTTGTTTTATCAGCTGTGCTTCAGAAGCCTGTAAGGGTGTAA 1260 0.454 MGSVSLKISDGSARFKRASLCSSALINTLMIFSVIITNLFALYAFTSSPHTHTHTHLPLHKNFSLISEQVTLILREINSSQNKLAQIQKHLLGYQSLDLSRPNIPSELKLFLHHHHLPLGKDSKTGITQMVSSIGHTCHKSSHLLSHYMTYNVSKPCPDDWSIAQKLILRGCEPLPRRRCFAKTISKANLLHPFPTSLWKPVANKTVNWSGLSCKSFECLSGKKLSRDCIGCFDLVNGYENERFVRSRSKSDFVVDQVLALGSGGVRIGLDVGGGSGSFAAVMAERNVTVVTITLNVDAPFSEFIAARGLFPLFLSLDHRLPFFDNVFDLVRCGSGLDGGGSPEKLEFLMFDVDRVLRAGGLFWMDNLCYVDEEKKRVLTRLIERFGYKKLKWVVGDKSVGSAKSHVVLSAVLQKPVRV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00288 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 242 382 IPR029063 -
Cca07g00288 419 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 1 419 - -
Cca07g00288 419 Gene3D Vaccinia Virus protein VP39 237 405 IPR029063 -
Cca07g00288 419 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 262 370 IPR004159 GO:0008168
Cca07g00288 419 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 1 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00288 Cca-Chr7 3780963 3782566 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00288 07 3780963 3782566 Cca07g00288 07 3780963 3782566 ECH
Cca05g00344 05 7473784 7475621 Cca07g00288 07 3780963 3782566 PCT