Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00275 ATGCTGTTTGGTTTAACTTATTATCTTTTCTTTCTATGCCAGGGATACACAATGATAGGATCTTTTCTTACGAGGGCACTAATGATGGTTTTTGGCTATGCCTACCCAGCCTATGAATGCTATAAATCAGTTGAAAAGAATAAGCCAGAAATTGATCAACTTCGCTTTTGGTGCCAGTACTGGATTTTGGTAGCTGTTTTGACAGTATGCGAGCGGATTGGTGATACTTTTATATCATGGGTCCCAATGTATAGTGAAGCTAAACTGGCATTTTTCATATACTTGTGGTGCCCGAAAACGAAGGGAACAACATATGTGTATGATTCCTTCTTTAGACCGTATGTTGCTAAACATGAGACAGAAATTGATCGCAACTTGTTGGAACTAAGGACAAGGGCAGGAGATATTGCAGTTTTGTATTGGCAAAAAGCTTTTAGTTATGGCCAGACTAGAATATTTGACATTTTGCAGTATGTTGCCTCACAATCAACACCTTCACCTCGCCCTGCTGAGCAACGACCAACTGTGAGGGTGCGTCAACCCTCATCTAGTAATAGCCAACCAGGGGCTGCAACAGAACCACAAGCTGAGAATCCATCTCCTCCTACTTCCAGCTCACCCAGTCAGCACCAGAAGGAAGTGGCAGAGGAGTTGGGTGCTTCACAAGTGCCTAAAGCACCCTCCTCCATTGTAGCAGGTTTAAGTAGCCTGAAGTCTAATCCTATTCCCGAAACCACCAATCAAACCGCACCTGCAGAGGCAAATCCAATGCAGATTGAAGCAGAAGCACCTTCTGCAAATGAAGATGAAAACCCTCCCTTGGAAGATACAATAATGGAAGAAAGCATTAGGGTTACACGAGGTAGACTAAGAAAGAATCGATCAGCTGGAATCCGTTAG 900 0.4333 MLFGLTYYLFFLCQGYTMIGSFLTRALMMVFGYAYPAYECYKSVEKNKPEIDQLRFWCQYWILVAVLTVCERIGDTFISWVPMYSEAKLAFFIYLWCPKTKGTTYVYDSFFRPYVAKHETEIDRNLLELRTRAGDIAVLYWQKAFSYGQTRIFDILQYVASQSTPSPRPAEQRPTVRVRQPSSSNSQPGAATEPQAENPSPPTSSSPSQHQKEVAEELGASQVPKAPSSIVAGLSSLKSNPIPETTNQTAPAEANPMQIEAEAPSANEDENPPLEDTIMEESIRVTRGRLRKNRSAGIR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00275 299 Pfam TB2/DP1, HVA22 family 36 114 IPR004345 -
Cca07g00275 299 MobiDBLite consensus disorder prediction 163 212 - -
Cca07g00275 299 MobiDBLite consensus disorder prediction 228 254 - -
Cca07g00275 299 MobiDBLite consensus disorder prediction 163 299 - -
Cca07g00275 299 PANTHER HVA22-LIKE PROTEINS 23 295 IPR004345 -
Cca07g00275 299 PANTHER HVA22-LIKE PROTEIN 23 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00275 Cca-Chr7 3532376 3535205 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00275 07 3532376 3535205 Cca07g00275 07 3532376 3535205 ECH
Cca05g00358 05 7871109 7877063 Cca07g00275 07 3532376 3535205 PCT