Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca07g00270 | ATGGCTCTCTCTAAGCTTCTAGTTGCATCCCTTCTGCTATCCTTTGTCCTCTTCCATCTCGTTCATGCTGATCAACCGGTAGCCGCACAGACTGAGGGTTCTTTTGTTCAGCAGATAGATTGCAATGCCGCATGTGGTGCGAGGTGCCGTTTAGCATCTCGTCAGCGCATGTGCCACAGAGCCTGTGGAACTTGCTGCAGACGGTGCAACTGCGTACCACCGGGAACTTCCGGTAACCAAGAAGTGTGTCCCTGCTATGCCAGTCTCACCACCCACGGTGGCAGACGCAAGTGCCCTTAG | 300 | 0.5433 | MALSKLLVASLLLSFVLFHLVHADQPVAAQTEGSFVQQIDCNAACGARCRLASRQRMCHRACGTCCRRCNCVPPGTSGNQEVCPCYASLTTHGGRRKCP | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca07g00270 | 99 | Pfam | Gibberellin regulated protein | 40 | 99 | IPR003854 | - | |
| Cca07g00270 | 99 | PANTHER | GIBBERELLIN-REGULATED FAMILY PROTEIN | 1 | 99 | - | - | |
| Cca07g00270 | 99 | PANTHER | EXTENSIN, PROLINE-RICH PROTEIN | 1 | 99 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca07g00270 | Cca-Chr7 | 3473693 | 3474736 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca07g00270 | 07 | 3473693 | 3474736 | Cca07g00270 | 07 | 3473693 | 3474736 | ECH | |
| Cca05g00366 | 05 | 8042799 | 8044369 | Cca07g00270 | 07 | 3473693 | 3474736 | PCT | |
| Cca07g00270 | 07 | 3473693 | 3474736 | Cca05g00364 | 05 | 7986841 | 7987644 | PCT |