Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00253 ATGGCTGTGTTTAATTGTTGTTCAAGTAGCTTAATTGTCCGTTTGATGATATTGTTTGTGTTATCGTGGAGAACAAAGGGGGTGGTGAAACTACCAGCTAATGTTTCAATCCCAGCAGTGATAGGTTTTGGAGATTCGATCGTGGACCCTGGCAACAACAACAGGATTCAAACCCTCGTCAAGTGCAATTTCCCTCCTTATGGTAAAGATTTTCAGGGAGGGACCCCTACCGGTCGATTTACCAATGGTAGAATTCCCTCAGATTTGCTAGTTGAAGAACTGGGTATTAAGGAGCTTTTACCAGCTTATTTGGATCCAAATCTGAAACCAAGTGACCTGGTAACTGGAGTCTGCTTTGCTTCTGGTGCTACCGGATACGATCCTTTAACGCCAAAAATTACGTCGGTGATATCAATGTCGGATCAACTAGAGATGTTCAAAGAATACATAGGGAAGCTTAAAAACATTGTTGGAGAGGAGAGAGCAAACTTCATCTTAGCCAACAGTTTTTACTTAGTGGTAGCTGGAAGTGACGACATTGCCAACACCTATTTCATCGCTCGCGTTCGACAATTACAATACGATATTCCTTCTTACACTGATCTTATGCTCAACTCCGCTTCTGATTTCGTAAAGGAATTATATAAACTTGGAGCACGCAGAATCGGAGTACTGAGTGCACCTCCGATAGGGTGCGTTCCATCACAGAGAACTCTGGCTGGAGGCATACAAAGAGATTGCGCAGAAAATTACAATTACGCGGCAAAGTTATTTAACTCAAAACTCTCGAGGGAACTAAATTCTCTTAACTACAACTTGCCCGATAGTAGGATCGTTTACATCGACGTTTACAACCCCCTATTAGATATCATTGTCAACTACCAACGTTATGGGTATAAAGTTGCGGATAGAGGTTGCTGTGGCACAGGCAAATTAGAGGTTTCTGTGTTATGCAACCATTTGGACGGCACTTGTCCCGATGATACGGAATATGTATTTTGGGATAGTTATCATCCTACCGAAAGAGTATACAGACAACTCATAGTCCAAATCCTTCAAAAATATTTGACTCGGTTCTTCTGA 1083 0.4192 MAVFNCCSSSLIVRLMILFVLSWRTKGVVKLPANVSIPAVIGFGDSIVDPGNNNRIQTLVKCNFPPYGKDFQGGTPTGRFTNGRIPSDLLVEELGIKELLPAYLDPNLKPSDLVTGVCFASGATGYDPLTPKITSVISMSDQLEMFKEYIGKLKNIVGEERANFILANSFYLVVAGSDDIANTYFIARVRQLQYDIPSYTDLMLNSASDFVKELYKLGARRIGVLSAPPIGCVPSQRTLAGGIQRDCAENYNYAAKLFNSKLSRELNSLNYNLPDSRIVYIDVYNPLLDIIVNYQRYGYKVADRGCCGTGKLEVSVLCNHLDGTCPDDTEYVFWDSYHPTERVYRQLIVQILQKYLTRFF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00253 360 CDD SGNH_plant_lipase_like 38 355 IPR035669 -
Cca07g00253 360 Gene3D SGNH hydrolase 28 356 IPR036514 -
Cca07g00253 360 PANTHER GDSL ESTERASE/LIPASE EXL3 8 358 - -
Cca07g00253 360 Pfam GDSL-like Lipase/Acylhydrolase 42 347 IPR001087 GO:0016788
Cca07g00253 360 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 8 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00253 Cca-Chr7 3186740 3193674 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00253 07 3186740 3193674 Cca07g00253 07 3186740 3193674 ECH
Cca05g00393 05 8662549 8667562 Cca07g00253 07 3186740 3193674 PCT
Cca07g00253 07 3186740 3193674 Cca05g00389 05 8488181 8495607 PCT