Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00587 ATGGGAACCAAAGTCCAGAATCTTCCAGGATATTACTCAATGAGAGATCTTAATGAGGAATCCAGCAGTTGTGGCTGGCCCCTATTTTATGGGGATAAATCACTCACAAATGGGCAGTACTATAATAATTATCTACCAAGTTCTACAACTGATGCATGTTCTGCATATGATAAGGATATTGTGAAGCGGATGATGCTTCAGCATGAGGCCATATTTAAGGATCAGGTCTGTGAACTTCACCGTCTGTACAGAATACAAAGGGATTTGATGAACGAGTTTAAAAGGAAAGATTTACACAGGAACCAGATACAGGTTGAGGCATCATTTTCCACAGATCCCTTGACATCTCAAGTAACAGCTGAAGACAGACAAAAATGGCATATTTCTGGCTTTCCTGTGGGAAATTCTACTTGTGCTAAAACATCTGTGTCCGGAGTTGAGGGCATTCATTCTCCATTGGGTTCTATGAAAGGGGTCAGCAAACAAACTAGTCCATTTCCATCCCCAAATGGGTGTAGTAGTTCAAAAGATGTTGAGGTGCTCGAGTCCCGGCCCTCAAAGGTGAGGAGGAAAATGTTTGACCTTCAGCTCCCTGCTGATGAGTACATTGATCCTGAGGAAAGTGAAAAGCTCAGTGATGAAAAGATAAGTGATCGATCATTCTTTCTTCCTGATGGAAACTGTAAAACTGGAAAGGAGGGTGATGTGAAACTTTTTTGCGGCAATGGTGGGAAGGCTGGCAGCCAGGAGGACACTTCAAGATCTGAGCAATCTTTTAGGAGAATAAATGGTTTGGCTGACTTAAATGAACCTGTTCAGGTGGAAGAAACATACAATTCTCCTTATGTTCAACTTTCTAGCCATAATCACTGTCAAGGGGCAACGGAATGCTCTGATCTCTCTGCCACTGCCAAACCAAATTCACAGATTTTTGGTTTGTCTAGGGAACAATTGCTCAACTCACATCATGTAACAGACAGTTGGACTCGAAATAATGGATATTTGGAGAACAATGGGAGTGGAAAAGGGTGGTATCCATCAGTGGTCGAGGCAGGGCAAGCTAAAAGCAACAGTGTTTCACAAGTCCTCAAACTGGAGAAATCACCTTTATCTTCCCAAACAATACAAGATGCACTTAGCAAAGTTCGTGAACCTGCATCCGATTATCTAAATGGTCGAAACAAGGCCGACACATGGAGGGAAAAGACAGTTAGTGATTTACATATCAGTGAAAGGAATCATGATTACTCCATCAATAAGCATCCCGAGTCTGTGTTACCCTTACATAGACCTGGTCTTTTTGCTGCTGCTCCTTCCTCTGATTTATCCAAGTCTTGGTCTCATTCGGCTTCTTCTTGGGAAATGGCAACTAGCAGCCTAAGCCAGAAGTTGATGTCAATTCAGACATCTCCATGTCTAAATGCATCTGGTGCTTTGAGTAGGAGTTCTCACTCACATCAAAGTAATGGGATATTGGAAGATAGTTGGCCTCTAAATATCAATTCCAAGCCTAACCCAGGTTATCGATGTGATGTCACTATACAGAACGGGTTTTACCCTGGGTCTTCATCTGGGTCCAAGGAACCATCAATGAACATCTCTTCTATTAGCTATGACCATCTCAATCATAATAATGATTGTAAGATAATTCCTGACCATTTCATCAACAATGGTTCATCAAAATCCTGCAAGGGTTCAAATTCAAATTGCAATGACATGAAGTCTGGAAAAGATATTGACTTGAATGCGCTGCTTCCAAATGGTTCAGGTTTTGGGACAATGAATGGAGAACAAAAGAACGAGGAGTGTCACGCAGTGTTGCCTTGGCTTAGAGGGAAGACAACTTGTAAGAATGAAGCACCAAATACTGCTGGAGGGGAGTCAAGTTTATTCAATGCTGCCTCATTGTCCAACAAAGATGAAGCCGGAAAGGGACCAAGTGGAAAATTAATGCACAATGAGAGCTCTAGTAATAAGAAAATTCTTGGTGTTCCCATATTTGATATGCCTCATATTTCTCCTAAAAAGGAGTTGTCTTCAATCACTTCTTCAGTGTCAAATCCTAATCCATCTGACGTAGAAGCAGTGGGAAATAAGAAAATTCGGATACTTGATATTAACTTGCCTTGTGATGCTGCTGCTGTTGAGTTGGACAAAGATGCATTCACTGAAACTGCTGTTAGTAAGACGAGATCTCCTACGACAGAAGCAGACTCTAGAAATCAAATTGATCTAAACTTGAGCATGAGTGAGGATGAAGGATCCTTCACAACTATTCCAAGTGACAATGCAAAAAAGAAGACAGAAATTGATTTGGAAGCTCCTGCTGTTCCCGAGATAGAGGAGGAAGCTGTTCCAGAAGAAAGGCAGCTTGAAACTTCTCTAGCATCACCACAAGTCCCACAGGACACAGTTGAACATCCAAAGGATGATGAACTTATGACAAATGCAGCACAGGCCATTGTTGTCCTGTCATCTCTTCCTTGTGATCTAGTAGATGGTGTGATCGGCAATAGTCCATCAGAAAATCCAAAGATGGACATGCTAAGTTGGTTGGCCGACGTAGTTTCCTCTTGCAAAGATAATCTAGAGGGCAAGTGTGATGTTTCAAGGGAAAAAGATGACGTGAGTAACGAGGAGCGTTCCTCCGAAGGAATGGATTACTTTGAGGCAATGATATTACAAATGCCGGAGACCAAGGAAGAAGACTACATGCCGAAGCCTCTTGTTCCGGAAAACTTCAAAGCAGAAGAAACAACTACATTGTTACCAACTCGAACAAGAAAAGGGCCAGCAAGGAGAGGGAGGCAGAGAAGGGACTTCCAAAGGGACATCCTTCCAGGCCTTGCATCTTTATCAAGGCATGAAGTAACAGAAGATCTTCAGACATTTGGAGGGCTTATGAGAGCAACAGGTTATTCATGGCAATCAGGATTAACTAGGAGAAGCTCGTCTAGGAATGGCGGTGGCAGGGGAAGGCGACGGGTGCAGGTTACTCCCTCTCCCCCGACACCAGTGGCAACCAATGAACCTAGCGCCCCGCTGATGCAGCAGCTTAATAACATTGAAGTTGGATTGGAGGATAGAAGCTTGACTGGTTGGGGCAAGACAACCAGAAGGCCCCGTCGACAGAGGTGCCCCGCCGGCAACCCTCCATTGATCCAGTTAACCTAA 3174 0.4332 MGTKVQNLPGYYSMRDLNEESSSCGWPLFYGDKSLTNGQYYNNYLPSSTTDACSAYDKDIVKRMMLQHEAIFKDQVCELHRLYRIQRDLMNEFKRKDLHRNQIQVEASFSTDPLTSQVTAEDRQKWHISGFPVGNSTCAKTSVSGVEGIHSPLGSMKGVSKQTSPFPSPNGCSSSKDVEVLESRPSKVRRKMFDLQLPADEYIDPEESEKLSDEKISDRSFFLPDGNCKTGKEGDVKLFCGNGGKAGSQEDTSRSEQSFRRINGLADLNEPVQVEETYNSPYVQLSSHNHCQGATECSDLSATAKPNSQIFGLSREQLLNSHHVTDSWTRNNGYLENNGSGKGWYPSVVEAGQAKSNSVSQVLKLEKSPLSSQTIQDALSKVREPASDYLNGRNKADTWREKTVSDLHISERNHDYSINKHPESVLPLHRPGLFAAAPSSDLSKSWSHSASSWEMATSSLSQKLMSIQTSPCLNASGALSRSSHSHQSNGILEDSWPLNINSKPNPGYRCDVTIQNGFYPGSSSGSKEPSMNISSISYDHLNHNNDCKIIPDHFINNGSSKSCKGSNSNCNDMKSGKDIDLNALLPNGSGFGTMNGEQKNEECHAVLPWLRGKTTCKNEAPNTAGGESSLFNAASLSNKDEAGKGPSGKLMHNESSSNKKILGVPIFDMPHISPKKELSSITSSVSNPNPSDVEAVGNKKIRILDINLPCDAAAVELDKDAFTETAVSKTRSPTTEADSRNQIDLNLSMSEDEGSFTTIPSDNAKKKTEIDLEAPAVPEIEEEAVPEERQLETSLASPQVPQDTVEHPKDDELMTNAAQAIVVLSSLPCDLVDGVIGNSPSENPKMDMLSWLADVVSSCKDNLEGKCDVSREKDDVSNEERSSEGMDYFEAMILQMPETKEEDYMPKPLVPENFKAEETTTLLPTRTRKGPARRGRQRRDFQRDILPGLASLSRHEVTEDLQTFGGLMRATGYSWQSGLTRRSSSRNGGGRGRRRVQVTPSPPTPVATNEPSAPLMQQLNNIEVGLEDRSLTGWGKTTRRPRRQRCPAGNPPLIQLT 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00587 1057 MobiDBLite consensus disorder prediction 157 177 - -
Cca06g00587 1057 MobiDBLite consensus disorder prediction 976 1012 - -
Cca06g00587 1057 PANTHER - 1 1056 - -
Cca06g00587 1057 PANTHER DUF863 FAMILY PROTEIN 1 1056 - -
Cca06g00587 1057 MobiDBLite consensus disorder prediction 1027 1057 - -
Cca06g00587 1057 Pfam Plant protein of unknown function (DUF863) 138 1047 IPR008581 -
Cca06g00587 1057 MobiDBLite consensus disorder prediction 778 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00587 Cca-Chr6 17055073 17061715 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00587 06 17055073 17061715 Cca06g00587 06 17055073 17061715 ECH