Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00577 ATGGATGCCAAAGTAACCTTTTGTTGTGTTCTCCTTTCATTATTTTGTCTATCTTTAGCAGAACATGTGAACCTTAGAGTGGAAACAGTGACAACCATTGCTACCACAGATGAAAATTTTGTTTGTGCAACTTTAGATTGGTGGCCTTCTAATAAGTGTAACTACGATCAATGTCCTTGGGTGAACGCAGGTGTTCTCAATATGGACTTTGGTAACAAAATTATAACAAATGCCATCAAGGCATTCAGTCCCTTGAGAATCAGATTAGGAGGTTCATTGGAAGATCAAATTGTTTACCAATTTGGAAAACAAAAGGAATGTCCCGTTATGAAAAAGAAACATAATGGTCTCTTTGGTTTCAGTGAAGGATGTCTTCCCAAAAAGAAATGGGATGAAATGAATAATTTTTTCAACAAAACTGACGTGAAATTCACTTTTGGGTTGAATGCCTTAATTGGAAAGAAAAATTCCCAGACCCACAAGGGTAACTGGGTGGGAAATTGGGATCCAACAAATGCCATAAGTCTCATGGAGTACACAATGTCAAAAGGATACAAAATTGATTCATATGAATTAGGAAATGAGTTATGCTCTGGTGGAGTAGGTGCTAGAGTAGATAGTGTTCAATATGCTAAAGACATCACTAAGCTAAAACGTGCAGTTAATTTACTATACCCAAATGAGAATACAAGGCCAAAGGTGCTAGGCCCTGGTGGTTTCTATGATAAGAATTGGTTTGATAGCTTCTTACAGAATGTTGAACCTGGTGTGGTTGATGGAATAACCCATCACATTTACAACCTTGGTGCTGGTGATGATAAGAATCTTATCCACAAGATTCAAAACCCATTTTATTTGAGCAAAGTTGCTCAAACATTCAAAGATGTCTCCGTAGCAGTCAATGAATACTCACCATCAGCAGGAGCATGGGTTGGAGAATCTGGTGGATCCTATAATAGTGGTGGCAAAGATGTTTCAAATACTTTTGTTAATGGCTTTTGGTACCTAGATCAGTTGGGAATGACATCAACATTCAACCACAAGGTTTATTGTAGACAAGCTCTAGTCGGCGGAAATTATGCTTTATTGAACACCACAACATTGATTCCTAACCCAGATTATTATGGAGCACTTTTGTGGCATCGACTTATGGGAAGTAAAGTACTTTCAGTTTTTCATGAAGGTTCTCCGTATTTACGTGCATATGCTCATTGTTCTAAGAAAGGGCCTGGTATCAGTGTGCTACTTATAAACATGTCCAATTCCACTTCCTTCCAAGTATCCCTTGACAATGACATGAATCTATACCCTTCTCTGGAGGCCCTAAAAAGAAAGACACCAAAGATTATGAGAGAAGAGTACCATTTGACACCTAAAGATGGAAATCTTCAAAGTGATGTAGTGCTGTTGAATGGAATTCCCCTAAAGTTGACCAAGTCAAAGGAGATTCCAAAAATGAAGCCAAAGTTGGTTCATACATTTGCTCCAATAACTGTGAAATCTGATTCAATTGTGTTTGTGCATAGCAAGAGTTTCGATGCACCAGCATGTAGTTAA 1557 0.3802 MDAKVTFCCVLLSLFCLSLAEHVNLRVETVTTIATTDENFVCATLDWWPSNKCNYDQCPWVNAGVLNMDFGNKIITNAIKAFSPLRIRLGGSLEDQIVYQFGKQKECPVMKKKHNGLFGFSEGCLPKKKWDEMNNFFNKTDVKFTFGLNALIGKKNSQTHKGNWVGNWDPTNAISLMEYTMSKGYKIDSYELGNELCSGGVGARVDSVQYAKDITKLKRAVNLLYPNENTRPKVLGPGGFYDKNWFDSFLQNVEPGVVDGITHHIYNLGAGDDKNLIHKIQNPFYLSKVAQTFKDVSVAVNEYSPSAGAWVGESGGSYNSGGKDVSNTFVNGFWYLDQLGMTSTFNHKVYCRQALVGGNYALLNTTTLIPNPDYYGALLWHRLMGSKVLSVFHEGSPYLRAYAHCSKKGPGISVLLINMSNSTSFQVSLDNDMNLYPSLEALKRKTPKIMREEYHLTPKDGNLQSDVVLLNGIPLKLTKSKEIPKMKPKLVHTFAPITVKSDSIVFVHSKSFDAPACS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00577 518 SUPERFAMILY (Trans)glycosidases 36 384 IPR017853 -
Cca06g00577 518 Pfam Glycosyl hydrolase family 79, N-terminal domain 23 340 IPR005199 GO:0016020|GO:0016798
Cca06g00577 518 PANTHER HEPARANASE-RELATED 10 517 - -
Cca06g00577 518 Gene3D Glycosidases 60 382 - -
Cca06g00577 518 PANTHER OS07G0598400 PROTEIN 10 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00577 Cca-Chr6 16929194 16931988 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00577 06 16929194 16931988 Cca06g00577 06 16929194 16931988 ECH