Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca06g00559 | atGGTTCCTCTGATGTGTTTTGTGCTATTTTTGGCCCTGGCTGGCCACTCAAGTGCTCTTTACTGTGTATGCAAAGATGGTGTGGGTGATCAAGCTTTGCAGAAAGCAATAGATTATGCATGTGGTGCTGGAGCTGATTGTACCCCTATTCTACAGAATGGAGTCTGTTACCAACCTAACACAGTGAAGGATCACTGCAACTATGCTGTTAATAGCTATTTCCAGAAAAAGGGTCAAATTCAGGGAAGTTGTGATTTTTCTGGTGCTGCTACCCCCAGTCAAACTCCACCTACTTCAGCTTCCACATGTGTTTACCCCTCAAGTCCAAGCAATTCAGGaacaggaaccacaacaaccccaacaaccactacaccatcaGGCACACCATCCACCTTGACTCCAACCACTCCCACTACTGGTATAACTCcaggcactggcactggcactggcacaggcacaaccacaggcacCACCACTGGTAGTCCTAATATGTTTGGAATGAGTCCAACATCTTCAACTGGAACAGGCTTCAATGACTCTAGCAAAGGGGTGGTTCACTTGAGAGACTCTTGCATGTTCCTAATGTCCCTTGTTCTCACCTTCTGGCTAGTGTCAAGGGTCTAA | 624 | 0.3958 | MVPLMCFVLFLALAGHSSALYCVCKDGVGDQALQKAIDYACGAGADCTPILQNGVCYQPNTVKDHCNYAVNSYFQKKGQIQGSCDFSGAATPSQTPPTSASTCVYPSSPSNSGTGTTTTPTTTTPSGTPSTLTPTTPTTGITPGTGTGTGTGTTTGTTTGSPNMFGMSPTSSTGTGFNDSSKGVVHLRDSCMFLMSLVLTFWLVSRV | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca06g00559 | 207 | PANTHER | PLASMODESMATA CALLOSE-BINDING PROTEIN 4 | 1 | 197 | - | - | |
| Cca06g00559 | 207 | Pfam | X8 domain | 21 | 91 | IPR012946 | - | |
| Cca06g00559 | 207 | SMART | X8_cls | 20 | 105 | IPR012946 | - | |
| Cca06g00559 | 207 | PANTHER | BETA-1,3 GLUCANASE | 1 | 197 | IPR044788 | - | |
| Cca06g00559 | 207 | MobiDBLite | consensus disorder prediction | 97 | 177 | - | - | |
| Cca06g00559 | 207 | Gene3D | - | 15 | 115 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca06g00559 | Cca-Chr6 | 16631108 | 16633488 | Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca06g00559 | 06 | 16631108 | 16633488 | Cca06g00559 | 06 | 16631108 | 16633488 | ECH |