Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00440 aTGGCGATTAGTTATTCACCGGTTCGTTGCCGCGTCCCCTCGCCGCATCGCACTTTCGCTTCTGCCTCGATTCTCGCGCCCACCGTCTTCTTCCGCGACGCCGCTCCGAGCCTCAGGCTCGTCTCGGTTCGGTCCCAGGCCCCAGGCTCGGACGGCGTCGCCCAACCCAAGAAACACGCGCGTGCCTCCGTTGGGTTTTCCGCTTCTTCCTCGTCCGTGATTGATTTTCTCACTCTCTGCCACCGCCTCAAGACCACAAAAAGGAAAGGATGGGTTAATCATGGGATAAAAGGTGCTGAATCGATTGCTGACCATATGTACCGCATGGCTTTAATGGCGTTGATTGCTGGTGATGTTCCTGGATTGAATAGAGAAAGATGTATTAAAATAGCACTCGTGCATGATATTGCAGAAGCTATTGTAGGAGACATAACACCATCTGATGGTGTGCCGAAGGCTGAAAAGAGCAGAAGGGAACAAGAAGCTTTGAACAAAATGTGTGAACTTCTTGGTGGAGGGATGAGAGCTGAAGAGATAAAAGAACTTTGGGCAGAGTATGAAAACAATTGTTCACTAGAGGCAAATCTTGTTAAGGATTTTGACAAGGTTGAAATGATTCTGCAAGCACTGGAATATGAAATAGAACATGGAAAAGTGTTGGATGAATTCTTCCTTTCAACTGCAGGGAAATTTCAAACTGAAATAGGAAAAAGTTGGGCAGCTGAGATCATTTCAAGAAGAAAATCTTTATCAGCAAAAAGGCTAAGTTGA 771 0.4669 MAISYSPVRCRVPSPHRTFASASILAPTVFFRDAAPSLRLVSVRSQAPGSDGVAQPKKHARASVGFSASSSSVIDFLTLCHRLKTTKRKGWVNHGIKGAESIADHMYRMALMALIAGDVPGLNRERCIKIALVHDIAEAIVGDITPSDGVPKAEKSRREQEALNKMCELLGGGMRAEEIKELWAEYENNCSLEANLVKDFDKVEMILQALEYEIEHGKVLDEFFLSTAGKFQTEIGKSWAAEIISRRKSLSAKRLS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00440 256 SMART hd_13 98 215 IPR003607 -
Cca06g00440 256 PANTHER METAL-DEPENDENT PHOSPHOHYDROLASE 23 254 - -
Cca06g00440 256 ProSiteProfiles HD domain profile. 102 206 IPR006674 -
Cca06g00440 256 Gene3D Hypothetical protein af1432 62 255 - -
Cca06g00440 256 Pfam HD domain 80 236 IPR006674 -
Cca06g00440 256 PANTHER UNCHARACTERIZED 23 254 IPR039356 GO:0002953
Cca06g00440 256 SUPERFAMILY HD-domain/PDEase-like 72 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00440 Cca-Chr6 13621439 13645266 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00440 06 13621439 13645266 Cca06g00440 06 13621439 13645266 ECH