Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00437 ATGGAGTATGAAGAACAACAATATCCCCTTTCTCTTCAACAACTTCTTTTGAGAGACTCTAAACTTCGTAACACAGACTATGTATTTGGAGTTGTCATCTTCACTGGTCATGACACGAAGGTCATTCAAAATTCCACTGACCCCCCTTCAAAGAGAAGAAAGGTTGAGAAGAAGATGGATAGGGTTATCTACTTCATGTTTTGCATTTTGTTTCTAATGGCAGTTGTTGGATCTATTTTCTTTGGCTTTACAACTAAAGATGACTTGGACAATGGAGTGATGAAAAGGTGGTATTTAAGACCAGATGATTCTACAATTTTCTTTGATCCTAAAAGAGCACCTGCTGCTGCTATATATCATTGTTTGACAGCCTTAATGTTATATGGTTTCTTCATTCCCATCTCATTATATGTTTCAATAGAAATTGTCAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCATATGTACTATGAAGATGCAGACAAACCAGCCCATGCCCGTACTTCAAACTTGAACGAGGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCGATGGAGTTCATCAAATGTTCCATTGCTGGGGTAGCTTATGGTCGTGGTGTTACGGAGGTTGAGAGGACAATGAGTAGAAAAAATGGTCCTGCTTTGATTGACAACCTAGGGGAATCTCCCGACCGAAATGTACCCATCAAAGGTTTTAACTTTACAGATGAAAGAATAATGAATGGAAAATGGGTTAATGAGACTAATGCAGATATTATCAAGAAATTTTTTCGCTTGTTGGCTATCTGCCATACAGCCATACCAGAAGTTGATGAAGAGACAGGAAATGTCTCATATGAGACTGAATCTCCAGATGAATCAGCATTCGTAATTGCAGCGAGAGAAATTGGATTTGAATTCTATAAAAGGACTCAGACTAGTTTGTCAATGTATGAATTAGATCCAGTTTCCGGTGACAAAATTGAAAGGACGTACAAACTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTCATAGTGAAAGATGAAAAAGGAAAAATTTTGCTACTCTGTAAAGGGGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGGATGGGAGGGAGTTTGAAGAGAAAACCTCAGAACATGTGCATGAATATGCTGATGCAGGTCTAAGGACCCTGATCCTGGCATATCGTGAACTTGATGAAAACCAATACAAGGAGTTTGATAGTAAATTTTCTCAAGCAAAAAATTCAGTTAGTGAAGATCGGGACACACTGATTGAGGAAGTATCAGACAAGATTGAGAGGAATCTAATTCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTAATTGCATTGACAAGCTTGCCCAGGCCGGAATTAAGATCTGGGTTTTGACTGGGGATAAAATGGAGACTGCGATCAATATTGGTTTTTCTTGTAGTTTACTTAGACAAGGAATGAAGCAGATTATTATTCATTTGGAAACTCAAGAAATTCAATCATTGGAGAAAGCGGGAGACAAGGTGGCCATTGCCAAGGCTTCAAGAGAAAGTATCCGCTATCAAATATCTGAAGCTGCTCAACAGCTTACTGCCTCCAAAGGAACCCCTCAGCAAGCATTTGCTCTAATTGTTGATGGAAAATCACTCACTTATGCCCTAGAGGACAATACAAAGAATATGTTTCTAGACCTTGCAGTTCGATGTGCATCCGTTATCTGCTGCCGTTCGTCACCGAAGCAGAAGGCTCTTGTCACCAGACTAGTCAAATCTGGAACTGGAAAAACTACATTAGCTATAGGTGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCTGATATAGGGGTTGGCATCAGTGGCGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCACAGTTTCGTTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGAAGGATCTCATCAATGATATGCTACTTTTTCTACAAGAACATCACATTTGGCTTTACTTTATTTTTATATGAGGTGTATGCATCCTTCTCTGGGCAACCTGCATACAATGACTGGTTTTTGTCTCTCTACAATGTCTTGTTTTCATCACTTCCTGTGATTGCTCTCGGGGTCTTTGACCAGGATGTGTCTTCTCGGTACTGTCTGAGGTTTCCTATGTTGTATCAAGAAGGCGTGCAGAATGTCCTCTTTAGCTGGCGTCGAATACTCAGCTGGATGCTCAATGGCTTTATTAGTGCTATAATAATTTTTTTCTTCTGCACAAAGGCAATGGAGATTCAAGCATTTGATGAGAAGGGAAGAACTGCTGGGAGAGATATACTCGGAGCAACGATGTTTACATGTGTGGTTTGGGTTGTGAACTTGCAGATGGCACTTGCTATAAATTACTTCACCTTGATTCAACATATTTTGATCTGGGGCTCTATTGCTCTTTGGTACCTTTTCCTTATAGCTTATGGAGCAATGTCTCCCAGCTTTTCAAAAAATGCTTACAAAGTCTTCATTGAAACTCTTGCTCCATCTCCTTCCTTTTGGATTATTACAGTGTTTGTGGCGATCACAACACTTATCCCATACTTCACTTTCTCAGCAATACAGATGAGGTTCTTTCCCATGTATCACGAAATGGTACAGTGGATAAGGCATGAGGGAAAGACAAATGATCCTGAATTTGTCGCTATGGTGCGCCAAGTGTCATTGCGGCCAACAACTGTTGGTCCGACAGCTCGCTTGGCAGCTAAGGATAATGACTTGAGAGACAGTGTCACTAACCATGGATAG 2853 0.4041 MEYEEQQYPLSLQQLLLRDSKLRNTDYVFGVVIFTGHDTKVIQNSTDPPSKRRKVEKKMDRVIYFMFCILFLMAVVGSIFFGFTTKDDLDNGVMKRWYLRPDDSTIFFDPKRAPAAAIYHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEDADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERTMSRKNGPALIDNLGESPDRNVPIKGFNFTDERIMNGKWVNETNADIIKKFFRLLAICHTAIPEVDEETGNVSYETESPDESAFVIAAREIGFEFYKRTQTSLSMYELDPVSGDKIERTYKLLNVLEFNSSRKRMSVIVKDEKGKILLLCKGADSVMFERLAKDGREFEEKTSEHVHEYADAGLRTLILAYRELDENQYKEFDSKFSQAKNSVSEDRDTLIEEVSDKIERNLILLGATAVEDKLQNGVPNCIDKLAQAGIKIWVLTGDKMETAINIGFSCSLLRQGMKQIIIHLETQEIQSLEKAGDKVAIAKASRESIRYQISEAAQQLTASKGTPQQAFALIVDGKSLTYALEDNTKNMFLDLAVRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVLFSSLPVIALGVFDQDVSSRYCLRFPMLYQEGVQNVLFSWRRILSWMLNGFISAIIIFFFCTKAMEIQAFDEKGRTAGRDILGATMFTCVVWVVNLQMALAINYFTLIQHILIWGSIALWYLFLIAYGAMSPSFSKNAYKVFIETLAPSPSFWIITVFVAITTLIPYFTFSAIQMRFFPMYHEMVQWIRHEGKTNDPEFVAMVRQVSLRPTTVGPTARLAAKDNDLRDSVTNHG 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00437 950 PRINTS P-type cation-transporting ATPase superfamily signature 617 636 - -
Cca06g00437 950 PRINTS P-type cation-transporting ATPase superfamily signature 184 198 - -
Cca06g00437 950 SUPERFAMILY Calcium ATPase, transmembrane domain M 47 895 IPR023298 -
Cca06g00437 950 SFLD Haloacid Dehalogenase 166 668 - -
Cca06g00437 950 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 589 699 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cca06g00437 950 Pfam Cation transport ATPase (P-type) 284 378 - -
Cca06g00437 950 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 945 - -
Cca06g00437 950 Pfam Phospholipid-translocating P-type ATPase C-terminal 645 895 IPR032630 -
Cca06g00437 950 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 945 - -
Cca06g00437 950 CDD P-type_ATPase_APLT_Dnf-like 3 766 - -
Cca06g00437 950 Gene3D - 453 657 IPR023214 -
Cca06g00437 950 SFLD p-type atpase 166 668 IPR044492 -
Cca06g00437 950 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 3 902 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cca06g00437 950 ProSitePatterns E1-E2 ATPases phosphorylation site. 186 192 IPR018303 -
Cca06g00437 950 SUPERFAMILY HAD-like 179 672 IPR036412 -
Cca06g00437 950 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 191 454 IPR023299 GO:0000166
Cca06g00437 950 Gene3D - 320 452 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00437 Cca-Chr6 13579120 13585137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00437 1 945 Primary Pumps ATPases AT1G68710 72.885 0.0 1502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00437 06 13579120 13585137 Cca06g00437 06 13579120 13585137 ECH