Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00432 ATGCACAACACATATGTTAGCTCAACAATATATGCTGTTAGGTGTCAAGATTCATTCTCATTATCTTTTAATGGCTACTCAAACTTCTGTTATGAAAGATTTGACAGAACCCCATCATACTGTTTGTCATGCTGTGGTTGTTGTGATTGTTGTTCTGTCTCCACTTACAGAGTACCCATAAAGCCTTGTCTTATAAGTGGTTTGAGGCAATCTTCTCTTCTTCAATTGTCAGCTTCTAGAAGGTTGATATTGGGTGGTGGAGATCCTTACTTTTCCCAGATACCAGCTTATGGTTTCCTCCGAGGTTGTGATGAGCTTAATTCTTCTGTCAATGAGAGAACTGTTTGCAATAATAGTAGACAGAGAATAAGGGGAAGATGTATTCGTGCTGCCTCTAAAAAAGGGAGAGAATTTTCACATCCATTTGGTTCTGATGATGCTGAAGCAATTCTCAGCTTGTTGAGTGAAGAATCAGATAAGGATGTTATTTGTAGCAAATGTAAGGATGTGTCTTCATCCAAAATAATGGATGCTGAGAAGAAAAGAAAAAATGTGAGCAGTGAGAGACATTTGAGTTTGAACGAGAAAGTAGAAACAGAGAAAAAAGGTAATTTTAAGCAACATGGATCATCCACCATAGACTTGAGAAGAGAGTATAAAAAACTCAACAAAGAAAGGGAAGCCTTTGTAAAAGGTGAAAATCATAGGAAACAAAGAGATGTGTCTAGTTGTTCATCTTATTATTCTCTCTCATCGGGAGATTTTGGGAATGAGCTGGAAGTTCAGGATGAGATTGGTTTGGAAGAGTCATCACTGGAACATGAGAAGGATGAAGCAAATCGTGTGGAGGAAGAATTCAACAGTGAAGGGGATGACAAAAAGAAGCTGCAAGATGTTTCTTATAATGAAAGAATTGCATTTGGTGTGGATATTGATTGGAACCTAAGGAAGAAGTCTGAAAAGAAGCTGACCGAGGGAACTGTGCAAAACACACAATTTATAAGAGAACAACAGGATATGCATTCAAGAAAATTTAAAACACATGAATCTGGTCATAAAAAATCATCCATGTCACAAAAGCTAGTCAATAATGAGGAAGATAAATCATCTTTTGTTGGCAATTTGGATATGAAAACAAACAAGTCATATATTCAAACAGTAAACAGAAGAAAACAGCAATCTAAAGATGTGCAAGAGACTGGTTGTGATGAAATTGAGACAACTTTGTTACCACAAAAAGAATTCAGTGGCAGGGAAGGGAAGCTTGGGATGTCAGAAAAACTGTTGAAGGAAACAACTGATGAACATAACAAAATTGTTGGTTCATCTTCGACCACAGGAAAGGAAATTTTGAAATCGAAGAAGGCATTCAGTGGAAGGGAAGGGAACCTCGCGATATCAGAAACACTTTTACAAGAAACAAATGATAAACACAAAAAATTTGTTGGTTCTACTTCTACTTCCGGAAAGGATGTGGTGGATAGAAGTTCCCAGAAATATACCGGAAATTTAAAAATTGAAGACACTGAAAGGACCTCAAGTACTCGAATACAGGACATAGGAGTGAAAAAAGCTTCAGTTTTGAGTACTGTTCAGGGAGTGGAGGAGCAGCAACACCAGAAAGGAGAGAAGATTATTATACAGGCTAAGGATAAAGAGAGAAGAGAAAAATCTCAACAATTTTCTGAAGCATCTCAAGCTCATGGGATTAATGTTGAAGATACGTCTATTATAAATTCTTTAACTAGATTAAAGAACTGGGAAGAAAAATCAAACATAAGCTCAGATGTATGGGGTACATGGCTTCAAACTGATAAAAGGACAAATCAGAGTTTCCAGCACAGGAAAGGATCTGAACATGCCAGCACTTTATCAGAAGGCTACGCCAGTGATGAAAAGCAAGTTTCAAGTTCTCAAAAAATTTATGAAAAGGTGAGATTCATTCCAAAAAGTAAATCATCAGTTGTTAGAACTAGAGAAAGTTCTAGCCAAACTGATGAAAGGATTGCAAATTTTAAATTGGCCGAAGAGGACCAAAGATCTAGCAACCTATCAATTTCTGATGAAACTGCCACAAGAGAGGAATCCAGCTCTCAGGGATCATTGAATTTGGTTTCTGGGGCTGGAAAACGTGTTATATTAGAAGCAGGTGAAGAAAGGAGCTTTGCAACAATGTTAGTCCCTTCCCCTTCTCAAATGGGTGGAGGCTCAGCACATGATGAACTCACTGCTGGAATCTCAAGCCCCAAGATCTTCCTTGGAACTTCAGAAAGTGGCTCTTCTGCTTTGTATGACAATTCAGGAAGAAGCTCTGCTGTGCATCCAGATTCTCTTGGTTCAGCTGATCGTTTAGAGAAATCATCTAGACAGTTTGTTGATGAGTTTGTTGAGAAGGTCAGGCACGAAGTAACAACTTCAGAAGAACAAGAGATGGAAGTTACAGGAACAAAGTTGACATTTGAAGTTGGTGGTAATCAGGTCTACAGCACAAGGACTCAAGGCACACAAAATGAAACCCAGTCAAAGGAGCATGATTCTAGTCGTTCCTCTGGGTTTCCTGGGACCAAAGGACCTTCTGATGAGATGTGGGACGTTACGGAACCATCTGTTGACCAAAGTCAAGTAGCCAAAGAAACAGAGATCAGCAAGGAAACTGGGAAATCAATTGTTACTAGAACTGGGAGGTCCTTATGGGGTATGATTGCTGATCTTGTTCGATTAAGATGGAGTTTGCGTGCTGGTTCCTCCACTTCAGCTGTAAGATCAGCTGAGAGAAACTCACCAAACAAGTCTGATAGTGACACATGGTTTTCTGGGCAGGAGCACGAGGAAGCCACTAAAACTAATGTCGCAAAAGAAACAAATGTACTACCACAAGCCATGACTTCTGATAAGTCAAAACGAGGTAAACATTATACCCAAAGTGAGGGAGAGGTGTCTGACAATACAAAATTGAAGGACGAAGGAAAGCATCTTGAAGTTGGATCGTCATCTCCAAATACATTGGAGAGTGGATCAACATCAGTTGGTGCCTCGTATATTTCTGTAGAGGAAAATGCTAGTTGGACTGAAGATAAGAAAGATTTGAAAGCCACCACTTCTGGCACACAAAACATGGAATTACCAATTTCAGTACCTGCCATGGGGCCTCCTATTGTAGGAGAAATTGTAAACATTGGTGGATCTGACATGTCTGGAACTGAGTCAGCAATGCCAATCAAGGCACCTGTTGCTCTAGTGCAGTCTGAATTGTCTGGCTTAGAGAGAAAGGATGGAGAGTTGAAGCAAAGGAAGTTTCAACGGAACAAACAAGTCTTGAAAGATAGGTTTGATGAGTGGGAAGAAGCCTATAAACGTGAATTTGAGCAGCGAAGAATAGATGAAATGTTCATGAAGGAAGCACTTTTGGAAGCCAAGAAGGCCGCTGATACATGGGAGGTCCCTGTTGGTGCTGTTCTTGTGCAGCATGGGAAAATTATTGCTCGAGGATGCAACTTAGTAGAGGAGTTACGGGACTCCACTGCCCATGCAGAGATGATTTGTATACGAGAAGCTTCAAACCTTCTTCGGACATGGAGACTATCTGATACTACACTTTATGTAACGCTTGAGCCATGTCCAATGTGTGCTGGTGCAATCCTTCAAGCAAGAATAGATACTCTTGTGTGGGGTGCTCCCAATAAGCTTCTTGGAGCAGATGGAAGCTGGATTAGGCTTTTCCCTGATGGTGGAGAAAATGTATCAGAACCAAAAGATATACCACCTGCCCCAGTTCATCCATTCCATCCGAAGATGAAAATAAGAAGAGGGGTCTTGGCAACAGAGTGTGCAGATGCAATGCAGCAATTCTTTCAGCTAAGAAGGAAAAAGAAGAAAGAGGAACCACCAAAGGAACCTTCTTGCCTTCCTGTTACTCACCACCACCCCTCCAAGTTTCTTAACAAGATGCATGACATCTTCCACATAATGTTTTGTTTGTAA 3981 0.4022 MHNTYVSSTIYAVRCQDSFSLSFNGYSNFCYERFDRTPSYCLSCCGCCDCCSVSTYRVPIKPCLISGLRQSSLLQLSASRRLILGGGDPYFSQIPAYGFLRGCDELNSSVNERTVCNNSRQRIRGRCIRAASKKGREFSHPFGSDDAEAILSLLSEESDKDVICSKCKDVSSSKIMDAEKKRKNVSSERHLSLNEKVETEKKGNFKQHGSSTIDLRREYKKLNKEREAFVKGENHRKQRDVSSCSSYYSLSSGDFGNELEVQDEIGLEESSLEHEKDEANRVEEEFNSEGDDKKKLQDVSYNERIAFGVDIDWNLRKKSEKKLTEGTVQNTQFIREQQDMHSRKFKTHESGHKKSSMSQKLVNNEEDKSSFVGNLDMKTNKSYIQTVNRRKQQSKDVQETGCDEIETTLLPQKEFSGREGKLGMSEKLLKETTDEHNKIVGSSSTTGKEILKSKKAFSGREGNLAISETLLQETNDKHKKFVGSTSTSGKDVVDRSSQKYTGNLKIEDTERTSSTRIQDIGVKKASVLSTVQGVEEQQHQKGEKIIIQAKDKERREKSQQFSEASQAHGINVEDTSIINSLTRLKNWEEKSNISSDVWGTWLQTDKRTNQSFQHRKGSEHASTLSEGYASDEKQVSSSQKIYEKVRFIPKSKSSVVRTRESSSQTDERIANFKLAEEDQRSSNLSISDETATREESSSQGSLNLVSGAGKRVILEAGEERSFATMLVPSPSQMGGGSAHDELTAGISSPKIFLGTSESGSSALYDNSGRSSAVHPDSLGSADRLEKSSRQFVDEFVEKVRHEVTTSEEQEMEVTGTKLTFEVGGNQVYSTRTQGTQNETQSKEHDSSRSSGFPGTKGPSDEMWDVTEPSVDQSQVAKETEISKETGKSIVTRTGRSLWGMIADLVRLRWSLRAGSSTSAVRSAERNSPNKSDSDTWFSGQEHEEATKTNVAKETNVLPQAMTSDKSKRGKHYTQSEGEVSDNTKLKDEGKHLEVGSSSPNTLESGSTSVGASYISVEENASWTEDKKDLKATTSGTQNMELPISVPAMGPPIVGEIVNIGGSDMSGTESAMPIKAPVALVQSELSGLERKDGELKQRKFQRNKQVLKDRFDEWEEAYKREFEQRRIDEMFMKEALLEAKKAADTWEVPVGAVLVQHGKIIARGCNLVEELRDSTAHAEMICIREASNLLRTWRLSDTTLYVTLEPCPMCAGAILQARIDTLVWGAPNKLLGADGSWIRLFPDGGENVSEPKDIPPAPVHPFHPKMKIRRGVLATECADAMQQFFQLRRKKKKEEPPKEPSCLPVTHHHPSKFLNKMHDIFHIMFCL 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00432 1326 MobiDBLite consensus disorder prediction 339 361 - -
Cca06g00432 1326 MobiDBLite consensus disorder prediction 268 293 - -
Cca06g00432 1326 Gene3D Cytidine Deaminase, domain 2 1115 1299 - -
Cca06g00432 1326 SUPERFAMILY Cytidine deaminase-like 1123 1292 IPR016193 GO:0003824
Cca06g00432 1326 MobiDBLite consensus disorder prediction 672 702 - -
Cca06g00432 1326 MobiDBLite consensus disorder prediction 964 993 - -
Cca06g00432 1326 Pfam MafB19-like deaminase 1128 1227 IPR028883 GO:0002100|GO:0008251
Cca06g00432 1326 PANTHER TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTIC 872 1316 - -
Cca06g00432 1326 Coils Coil 265 285 - -
Cca06g00432 1326 MobiDBLite consensus disorder prediction 824 854 - -
Cca06g00432 1326 Coils Coil 1096 1116 - -
Cca06g00432 1326 MobiDBLite consensus disorder prediction 915 1009 - -
Cca06g00432 1326 MobiDBLite consensus disorder prediction 760 785 - -
Cca06g00432 1326 MobiDBLite consensus disorder prediction 915 935 - -
Cca06g00432 1326 Hamap tRNA-specific adenosine deaminase [tadA]. 1131 1288 IPR028883 GO:0002100|GO:0008251
Cca06g00432 1326 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 872 1316 - -
Cca06g00432 1326 MobiDBLite consensus disorder prediction 760 774 - -
Cca06g00432 1326 MobiDBLite consensus disorder prediction 676 702 - -
Cca06g00432 1326 MobiDBLite consensus disorder prediction 615 635 - -
Cca06g00432 1326 MobiDBLite consensus disorder prediction 609 635 - -
Cca06g00432 1326 MobiDBLite consensus disorder prediction 339 365 - -
Cca06g00432 1326 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1125 1247 IPR002125 -
Cca06g00432 1326 MobiDBLite consensus disorder prediction 824 881 - -
Cca06g00432 1326 MobiDBLite consensus disorder prediction 994 1009 - -
Cca06g00432 1326 CDD nucleoside_deaminase 1131 1238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00432 Cca-Chr6 13511800 13518914 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00432 06 13511800 13518914 Cca06g00432 06 13511800 13518914 ECH