Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00427 ATGGTGAAGTTCTCAAAGCAGTTTGAAGGGCAACTCATTCCAGAATGGAAAGAGGCCTTTGTTGATTACTGGCAACTCAAGAAGGACCTCAAAAAAGTTCATCTCTTTAATAATACCAACAATACCCCCAACAATAGTACCACTTCTCTACCTAAGTACATATTTTCATCAATAAGAAACTACTCTCTCTTTGGCCATCAACAAAGAGAGCATGGACCAATTCAAGTCCATAGAAAACTTGCCTCATCATCTTTTAATGGGGACATGTATGAGACAGAACTGCTAGAGCAATTCTCTGACACTGATGCCACCAAAGAATTTTTTGCGTGTCTGGACCAGCAACTAAACAAGGTCAACAAGTTTTATAGGACTAAGGAGAAAGAGTTCATGGATAGAGGGGATTCCTTGAAAAAACAAATGGACATTCTTCTTATGCTCAAATCCACATTCAAGGAGCAGCAGAGCACAGCAGGCTCTTCCCATGGCTCCAAGGAGGATCAATCTATCTCATGCACATTCTCTAATGAGGAGGACTCTGTTAGGAGCAGAGCAACACAAGAAGAAATGCAAGACACTACTAGCACTGATGATGTGGAGAAAAATGAAGCACCATTTTCAGATTCCCCTCGTGCAGATGGACTATCCAAGTCTATGCAGATGAAAAGAGAAGAAGGGAAATTGAGAACACTTTCTGGTCGTGTTATCAATTGCCAAGGGAAGAATCTGAGGATAAACATTCCTCTGACAACACCATCTCGAACCTTCTCAGCTATAAGCTACCTTCTAAGAGAAGATTTGCTTAACCAATCTTCAAGGAAATGTGGTCCAGAAGGTGCCAACATTCACCTAAACAAAAGTAATTTGCACCATGCTGAAAAGATGATCAAAGGAGGTTTCGTTGAACTCTACAAAGGACTAGGATATCTCAAAGTTTATAGGAACTTGAACATGCTTGCATTTATAAAGATTCTGAAGAAGTTTGATAAGGTCACTGCAAAACAAATTCTTCCTATCTATCTCAAAGTGGTTGAGAGTTCCTATTTCAATAGCTCAGACAAGGTGATGAAGTTAGCTGACGAAGTTGAGGAACTATTCATCAAAAATTTTGCTGAGGATAATAGAAGAAAGGCCATGAAGTACCTTAGACCAAGCCAGCGAAAAGAATCACATGCTGTAACTTTCTTCATTGGACTATTTACTGGATGCTTCTTGGCACTTCTTGCGGGATATGCTATAATGGCTCATGTGACTGGTTTGTACAGACCACATCAAAATTCAGTGTACATGGAAACTACCTACCCTGTGCTTAGCATGTTCAGCCTTGTGTTCCTACATTTCTTCCTTTATGGTTGCAACATTCTTGCATGGAGAAAAAATCGTATAAACTACGGCTTCATTTTTGAGCTGGCACCTACCAAAGAACTCAAGTATAGAGATATATTCTTAATTTGCACAATGGCGATGAGTGCTGTGGTTGGTGTAATGTTTCTTCATTTGACTCTACTGACAAAAGGGTATTCTTATGCCCAAGTTCAAGACATTCCCGGACTTCTTATTCTGGGCTTCTTACTAATACTAGTATGCCCCTTCAACATTATATACCGGTCAAGCCGTTATCGTTTCCTTTGTGTGATAAGGAACATAATTTTGTCACCCCTTTACAAGGTTGTCATGCTGGATTTTTTCATGGCTGATCAACTTTGTAGTCAGGTTCCAATGCTAAGGAGCCTTGAGTACATGGCATGTTATTATATAACTGGTAGCTACAAAACTCAGGATTATGGATATTGCATGAGGACAAAGCACTATAGAGATCTAGCTTATGCAGTGTCATTTCTACCCTATTATTGGAGGGCTATGCAGTGTGCTAGAAGATGGTTTGATGAAGGGCAAACAAGCCACCTTGTGAATCTAGGAAAATATGTATCAGCAATGTTAGCAGCAGGTGCCAAAGTGGCATATGAGAAAGATGGGAGCGTAGGGTGGCTGTGTCTTCTTGTGATCATGTCTAGTGCTGCAACTGTGTACCAATTGTACTGGGACTTTGTAAAAGATTGGGGTTTGCTTCAAATGAATTCCAAGAATCCATGGCTAAGGAATGAACTAGTGCTTCAAAGAAGAGTCATTTACTACTTGTCAATGGGATTAAATCTCATTCTGAGGCTTGCTTGGTTGCAAACTGTCCTTCATTCAAGTTTTGAAAACGTTGATTATCGAGTAACATGCTTGTTTTTAGCATCTCTTGAAGTTATTAGACGAGGGCTATGGAACTTCTTCAGATTGGAGAATGAGCATCTAAATAATGCTGGCAAGTTTAGAGCAGTGAAGATAGTACCACTTCCTTTTCATGAAGTGGATGAAGAAGACTTATAA 2373 0.3982 MVKFSKQFEGQLIPEWKEAFVDYWQLKKDLKKVHLFNNTNNTPNNSTTSLPKYIFSSIRNYSLFGHQQREHGPIQVHRKLASSSFNGDMYETELLEQFSDTDATKEFFACLDQQLNKVNKFYRTKEKEFMDRGDSLKKQMDILLMLKSTFKEQQSTAGSSHGSKEDQSISCTFSNEEDSVRSRATQEEMQDTTSTDDVEKNEAPFSDSPRADGLSKSMQMKREEGKLRTLSGRVINCQGKNLRINIPLTTPSRTFSAISYLLREDLLNQSSRKCGPEGANIHLNKSNLHHAEKMIKGGFVELYKGLGYLKVYRNLNMLAFIKILKKFDKVTAKQILPIYLKVVESSYFNSSDKVMKLADEVEELFIKNFAEDNRRKAMKYLRPSQRKESHAVTFFIGLFTGCFLALLAGYAIMAHVTGLYRPHQNSVYMETTYPVLSMFSLVFLHFFLYGCNILAWRKNRINYGFIFELAPTKELKYRDIFLICTMAMSAVVGVMFLHLTLLTKGYSYAQVQDIPGLLILGFLLILVCPFNIIYRSSRYRFLCVIRNIILSPLYKVVMLDFFMADQLCSQVPMLRSLEYMACYYITGSYKTQDYGYCMRTKHYRDLAYAVSFLPYYWRAMQCARRWFDEGQTSHLVNLGKYVSAMLAAGAKVAYEKDGSVGWLCLLVIMSSAATVYQLYWDFVKDWGLLQMNSKNPWLRNELVLQRRVIYYLSMGLNLILRLAWLQTVLHSSFENVDYRVTCLFLASLEVIRRGLWNFFRLENEHLNNAGKFRAVKIVPLPFHEVDEEDL 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00427 790 CDD SPX 264 329 - -
Cca06g00427 790 PANTHER PHOSPHATE TRANSPORTER PHO1 HOMOLOG 1 2 789 - -
Cca06g00427 790 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 2 789 - -
Cca06g00427 790 MobiDBLite consensus disorder prediction 153 225 - -
Cca06g00427 790 ProSiteProfiles EXS domain profile. 598 790 IPR004342 GO:0016021
Cca06g00427 790 ProSiteProfiles SPX domain profile. 2 341 IPR004331 -
Cca06g00427 790 Pfam EXS family 434 766 IPR004342 GO:0016021
Cca06g00427 790 Pfam SPX domain 2 343 IPR004331 -
Cca06g00427 790 MobiDBLite consensus disorder prediction 153 179 - -
Cca06g00427 790 CDD SPX_PHO1_like 3 337 IPR034092 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00427 Cca-Chr6 13402539 13409030 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00427 06 13402539 13409030 Cca06g00427 06 13402539 13409030 ECH